Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL355379.1-201ENST00000405542 640 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 MTCO3P43-201ENST00000440974 771 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 RPL26P28-201ENST00000451325 435 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC108729.2-201ENST00000476543 840 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC073522.1-201ENST00000483312 377 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC112198.1-201ENST00000505369 1220 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC010468.3-201ENST00000508225 458 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 SNORA74D-201ENST00000516404 141 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 IGKV2-26-201ENST00000518305 343 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC104115.2-201ENST00000523026 687 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC007458.1-201ENST00000542812 373 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC104229.1-201ENST00000561364 255 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC010928.3-201ENST00000587712 541 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC015967.1-201ENST00000619893 476 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 AL109659.3-201ENST00000624985 950 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL21A1Q96P44 AC008432.1-201ENST00000615912 1320 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 MTCO1P12-201ENST00000414273 1543 ntBASIC3.14□□□□□ -1.91
COL21A1Q96P44 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL21A1Q96P44 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 RPL7P26-201ENST00000333817 754 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL21A1Q96P44 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL21A1Q96P44 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 MIR634-201ENST00000385208 97 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 MTCYBP24-201ENST00000420387 1106 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 RPL21P110-201ENST00000433345 446 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC010265.1-201ENST00000513509 211 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 OR5D17P-201ENST00000531492 978 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 AP000619.3-201ENST00000535634 1127 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 MTCYBP28-201ENST00000566728 1132 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC084757.4-201ENST00000616350 526 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 U73479.1-201ENST00000618062 168 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 AC068620.4-201ENST00000636730 1182 ntBASIC3.13□□□□□ -1.91
COL21A1Q96P44 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL21A1Q96P44 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL21A1Q96P44 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.13□□□□□ -1.91
COL21A1Q96P44 ELL2P4-201ENST00000446870 1376 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL157700.1-201ENST00000561973 1432 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 RNU6-1151P-201ENST00000384684 107 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 MIR491-201ENST00000384877 84 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 MIR525-201ENST00000384978 85 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 RNU6-272P-201ENST00000411028 104 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL158825.1-201ENST00000414735 521 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 HSFY4P-201ENST00000415994 1181 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC006960.1-201ENST00000419980 153 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL138799.3-201ENST00000438968 350 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC004865.1-201ENST00000442276 1003 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 RPL23AP15-201ENST00000450202 459 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC015724.1-201ENST00000478577 156 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC092451.1-201ENST00000480211 153 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 RPL31P13-201ENST00000484151 370 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms