Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OR4G11P-202ENST00000642116 1414 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC011266.1-201ENST00000624119 3569 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC022893.2-201ENST00000564832 3296 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AL513185.3-201ENST00000433335 1300 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AL139811.1-201ENST00000424779 2299 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
BEST3Q8N1M1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
BEST3Q8N1M1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
BEST3Q8N1M1 ZNF33CP-201ENST00000432492 2030 ntBASIC3.9□□□□□ -1.78
BEST3Q8N1M1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.9□□□□□ -1.78
BEST3Q8N1M1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
BEST3Q8N1M1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
BEST3Q8N1M1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 RPL21P132-201ENST00000331267 462 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 MIR372-201ENST00000362225 67 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 RNU6-500P-201ENST00000362349 107 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC019155.1-201ENST00000382242 574 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 SNORD116-1-201ENST00000384335 95 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 Y_RNA.560-201ENST00000384689 102 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC016769.3-201ENST00000396562 315 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 RN7SKP33-201ENST00000410942 340 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AL049610.1-201ENST00000423374 372 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 RPS12P5-201ENST00000423449 371 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC093698.1-201ENST00000423843 571 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 MTND1P20-201ENST00000430341 950 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 RPL23AP74-201ENST00000437246 471 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 ISCA1P2-201ENST00000438679 421 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC026410.2-201ENST00000460281 156 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 RPS29P19-201ENST00000479709 171 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AF213884.1-201ENST00000488102 463 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC112198.1-201ENST00000505369 1220 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC093824.1-201ENST00000508796 343 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 IFITM8P-201ENST00000522529 394 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC105233.3-201ENST00000531125 744 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 CYP4A43P-201ENST00000568156 121 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AL109618.2-201ENST00000605527 211 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AL513477.2-201ENST00000607858 568 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 MIR6867-201ENST00000610636 67 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC018816.2-201ENST00000621460 353 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC127502.3-201ENST00000636170 1206 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC099063.3-201ENST00000642066 185 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AC016588.2-201ENST00000632484 3021 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 GDI2P1-201ENST00000429312 1336 ntBASIC3.9□□□□□ -1.79
BEST3Q8N1M1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BEST3Q8N1M1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RNU6-462P-201ENST00000362659 105 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RNA5SP130-201ENST00000364431 114 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RNA5SP88-201ENST00000365560 109 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RPL23AP39-201ENST00000415533 405 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC108032.1-201ENST00000416706 207 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AL356095.1-201ENST00000417217 199 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC019178.2-201ENST00000423595 505 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 HLA-N-201ENST00000437516 135 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RPL23AP46-201ENST00000438548 490 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 ELOCP8-201ENST00000439309 332 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 ELOCP15-201ENST00000442090 332 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AL451050.1-201ENST00000450126 415 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms