Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC007738.1-201ENST00000413892 348 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AF186996.5-201ENST00000418098 904 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 ZNF90P2-204ENST00000419323 1075 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RPL31P35-201ENST00000431058 377 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC098614.3-201ENST00000438957 440 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RPL7P15-201ENST00000461190 712 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL443P-201ENST00000464331 290 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC063943.1-201ENST00000465434 453 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL319P-201ENST00000480656 221 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RPS29P25-201ENST00000481709 171 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MTND1P35-201ENST00000526739 508 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AP003181.2-201ENST00000528941 181 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC063949.1-201ENST00000552900 865 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC093591.2-201ENST00000565254 3843 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RPL12P25-202ENST00000598100 674 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC121334.2-201ENST00000605387 271 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AP001330.5-201ENST00000607176 411 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC009268.2-201ENST00000621925 457 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MIR6810-201ENST00000622701 70 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC004009.2-201ENST00000623016 728 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC005332.5-201ENST00000591222 2919 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC024560.2-201ENST00000507981 1497 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-28P-201ENST00000362378 107 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RNA5SP191-201ENST00000362585 102 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 Y_RNA.38-201ENST00000362617 102 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RNA5SP391-201ENST00000363456 119 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-853P-201ENST00000364306 107 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-761P-201ENST00000384148 107 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC013442.1-201ENST00000397347 228 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC104333.2-201ENST00000422630 192 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC104073.1-201ENST00000451988 151 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 MTND1P11-201ENST00000456661 876 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL481P-201ENST00000477764 299 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC011005.3-201ENST00000491624 395 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-445P-201ENST00000516949 107 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 MIR4697-201ENST00000582977 78 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC068790.5-201ENST00000602741 355 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 BNIP3P9-201ENST00000603714 553 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AL391646.1-201ENST00000603860 190 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 Z95327.3-201ENST00000610385 572 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 MIR6839-201ENST00000620425 113 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC012150.2-201ENST00000621300 544 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AL732618.1-201ENST00000623251 301 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC139792.3-201ENST00000623525 224 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC009033.1-201ENST00000624279 431 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AP003400.5-201ENST00000624827 617 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC026951.1-201ENST00000559530 2459 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 AC100778.3-201ENST00000580060 1750 ntBASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RUFY4Q6ZNE9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RUFY4Q6ZNE9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RUFY4Q6ZNE9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RUFY4Q6ZNE9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 ELL2P4-201ENST00000446870 1376 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 MFSD8-216ENST00000641147 4009 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 ZNF652P1-201ENST00000442420 1309 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AL122126.1-201ENST00000546905 1318 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-1243P-201ENST00000364028 107 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-483P-201ENST00000384088 108 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms