Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT40Q6A162 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 OR56B2P-202ENST00000641377 2453 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 RNU1-130P-201ENST00000363930 160 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 RN7SKP224-201ENST00000364140 325 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 RNA5SP22-201ENST00000365393 109 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 SNORA70.4-201ENST00000365509 134 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT40Q6A162 TMSB4XP8-201ENST00000402089 135 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 AL078604.1-201ENST00000404609 466 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 HDGFP1-201ENST00000405943 252 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 RNU6-272P-201ENST00000411028 104 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 SNORA74C-2-201ENST00000411179 201 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 TMSB4XP6-201ENST00000415187 135 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AL139095.3-201ENST00000419672 1203 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 MTCO3P1-205ENST00000422088 832 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 TMSB4XP1-201ENST00000424567 135 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AP000936.3-201ENST00000438127 255 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 ELOCP10-201ENST00000440624 327 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AC244505.5-201ENST00000443639 207 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AL035551.1-201ENST00000446931 348 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 VN1R34P-201ENST00000447387 883 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AC002553.2-201ENST00000453217 340 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC012158.1-204ENST00000483430 465 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC108941.1-201ENST00000502853 530 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 RNA5SP497-201ENST00000516081 97 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 IGLVIV-65-201ENST00000517313 360 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT40Q6A162 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT40Q6A162 ZNF519P2-201ENST00000557032 169 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC093519.1-201ENST00000566109 298 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 RPL23AP97-201ENST00000568955 471 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AC006130.2-201ENST00000586202 326 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT40Q6A162 ELOCP34-201ENST00000604436 327 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 Z98200.1-201ENST00000607298 470 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AL354760.1-201ENST00000608357 643 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC004067.1-201ENST00000608733 700 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC023043.4-201ENST00000612081 449 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC090970.3-201ENST00000612566 866 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC091834.1-201ENST00000614543 472 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT40Q6A162 AP000843.1-201ENST00000624880 701 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.12□□□□□ -1.59
KRT40Q6A162 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT40Q6A162 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
KRT40Q6A162 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 GDI2P1-201ENST00000429312 1336 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 CYP1D1P-201ENST00000416662 1433 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT40Q6A162 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT40Q6A162 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
KRT40Q6A162 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRT40Q6A162 AP001273.1-201ENST00000624493 3152 ntBASIC5.12□□□□□ -1.59
KRT40Q6A162 AC009951.1-201ENST00000623674 2614 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KRT40Q6A162 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KRT40Q6A162 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
KRT40Q6A162 AL512646.1-201ENST00000269395 1077 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KRT40Q6A162 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
KRT40Q6A162 RNU6-694P-201ENST00000364071 147 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 RN7SKP280-201ENST00000364196 304 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 Y_RNA.256-201ENST00000364594 104 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT40Q6A162 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
KRT40Q6A162 MTND4LP20-201ENST00000402379 270 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 RPS24P8-201ENST00000431490 402 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 MTND3P21-201ENST00000433774 331 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT40Q6A162 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.11□□□□□ -1.59
KRT40Q6A162 WASF1P1-201ENST00000447560 1131 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 AL162591.2-201ENST00000449634 317 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 AC091564.1-201ENST00000464563 479 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
KRT40Q6A162 AC091133.4-201ENST00000511142 308 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 RNU6-583P-201ENST00000516012 92 ntBASIC5.11□□□□□ -1.59
KRT40Q6A162 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT40Q6A162 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT40Q6A162 DEFB108A-201ENST00000530110 222 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms