Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU4-47P-201ENST00000410876 114 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.9□□□□□ -1.79
GABPAQ06546 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 ARF4P4-201ENST00000439608 520 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.9□□□□□ -1.79
GABPAQ06546 snoU13.24-201ENST00000458998 104 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 NAP1L1P3-201ENST00000462291 880 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AP000926.1-201ENST00000479573 241 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 HMGB1P38-201ENST00000490557 577 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 SUMO2P5-201ENST00000506790 245 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AC090071.1-201ENST00000507713 644 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
GABPAQ06546 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC005351.1-201ENST00000511152 786 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 IGKV2-23-201ENST00000518729 323 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC008687.2-201ENST00000597865 520 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.9□□□□□ -1.79
GABPAQ06546 AC124312.4-201ENST00000605533 310 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GABPAQ06546 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.9□□□□□ -1.79
GABPAQ06546 MIR6864-201ENST00000617935 70 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AC010872.1-201ENST00000624225 675 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AL356118.1-201ENST00000635272 1078 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 BX649567.1-201ENST00000642071 1134 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 XPOTP1-201ENST00000443317 2398 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
GABPAQ06546 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
GABPAQ06546 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
GABPAQ06546 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
GABPAQ06546 AL031985.3-201ENST00000565390 2449 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.9□□□□□ -1.79
GABPAQ06546 MTND4P8-201ENST00000514997 1362 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GABPAQ06546 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
GABPAQ06546 RNU6-525P-201ENST00000363685 104 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
GABPAQ06546 LIPT1P1-201ENST00000415870 1186 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 PTP4A1P7-201ENST00000423476 514 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 FTH1P6-201ENST00000430768 320 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.89□□□□□ -1.79
GABPAQ06546 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.89□□□□□ -1.79
GABPAQ06546 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.89□□□□□ -1.79
GABPAQ06546 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.89□□□□□ -1.79
GABPAQ06546 PRDX3P4-201ENST00000470828 747 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AC008427.1-201ENST00000503102 655 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AC069306.1-201ENST00000507006 843 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.89□□□□□ -1.79
GABPAQ06546 APOOP4-201ENST00000513530 597 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 RN7SKP82-201ENST00000516786 223 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GABPAQ06546 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
GABPAQ06546 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.89□□□□□ -1.79
GABPAQ06546 AC004217.3-201ENST00000551552 878 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 GTF2IP8-201ENST00000560687 584 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.89□□□□□ -1.79
GABPAQ06546 AP002802.2-201ENST00000605877 235 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AC113194.1-201ENST00000606037 500 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AC112503.1-201ENST00000608436 391 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 RNU6-1192P-201ENST00000612197 107 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 RNU6-489P-201ENST00000618289 107 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 AC026422.1-201ENST00000623961 452 ntBASIC3.89□□□□□ -1.79
GABPAQ06546 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
GABPAQ06546 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
GABPAQ06546 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
GABPAQ06546 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GABPAQ06546 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
GABPAQ06546 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GABPAQ06546 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.88□□□□□ -1.79
GABPAQ06546 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GABPAQ06546 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.88□□□□□ -1.79
GABPAQ06546 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.88□□□□□ -1.79
GABPAQ06546 RNU6-1293P-201ENST00000384077 107 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 RNU6-549P-201ENST00000384433 107 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 RNA5SP229-201ENST00000410809 99 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.88□□□□□ -1.79
GABPAQ06546 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.88□□□□□ -1.79
GABPAQ06546 AC127537.2-201ENST00000439258 465 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.88□□□□□ -1.79
GABPAQ06546 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.88□□□□□ -1.79
GABPAQ06546 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.88□□□□□ -1.79
GABPAQ06546 RPS29P2-201ENST00000479278 136 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AC021205.2-201ENST00000480069 347 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.88□□□□□ -1.79
GABPAQ06546 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.88□□□□□ -1.79
GABPAQ06546 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.88□□□□□ -1.79
GABPAQ06546 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.88□□□□□ -1.79
GABPAQ06546 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.88□□□□□ -1.79
GABPAQ06546 HIGD1AP1-201ENST00000550979 275 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms