Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RPL21P132-201ENST00000331267 462 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 MIR383-201ENST00000362257 73 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 RNU1-14P-201ENST00000362759 152 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 SNORA70.2-201ENST00000364506 135 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 SNORD66.1-201ENST00000391230 76 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 ARF4P3-201ENST00000397387 509 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 EIF5P1-201ENST00000400019 1231 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC136624.1-201ENST00000400791 413 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 HMGB1P17-201ENST00000403495 628 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AL031577.2-201ENST00000404133 280 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC019178.2-201ENST00000423595 505 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 EIF1P3-201ENST00000423841 334 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 RSL24D1P6-201ENST00000426934 401 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 BMS1P19-201ENST00000433925 393 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AL132765.1-201ENST00000434165 553 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 ISCA1P2-201ENST00000438679 421 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AF228730.2-201ENST00000438784 848 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 MTCO3P16-201ENST00000454456 754 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC026410.2-201ENST00000460281 156 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC072039.1-201ENST00000477611 581 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC104986.1-201ENST00000517978 436 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 PARP1P2-201ENST00000556806 195 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 RNU6-88P-201ENST00000606801 100 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 AC024560.3-201ENST00000608482 349 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC018816.2-201ENST00000621460 353 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC008785.1-201ENST00000624475 456 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 PCMTD1P7-201ENST00000634506 357 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.85□□□□□ -1.79
CLDN20P56880 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 MIR4496-201ENST00000635896 61 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 AC099063.3-201ENST00000642066 185 ntBASIC3.85□□□□□ -1.79
CLDN20P56880 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN20P56880 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN20P56880 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CLDN20P56880 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN20P56880 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN20P56880 NOL8P1-201ENST00000508336 3529 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 Y_RNA.560-201ENST00000384689 102 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC016769.3-201ENST00000396562 315 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN20P56880 RPL23AP39-201ENST00000415533 405 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AL049610.1-201ENST00000423374 372 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 RPL23AP38-201ENST00000423801 469 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC093698.1-201ENST00000423843 571 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 MTND1P20-201ENST00000430341 950 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 RPL23AP74-201ENST00000437246 471 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 MTND2P4-201ENST00000445034 1004 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 ABCF2P2-201ENST00000450549 296 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 RPS27AP8-201ENST00000452665 445 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC009963.2-201ENST00000453431 138 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 RPL37P6-202ENST00000464216 403 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN20P56880 AC092045.1-201ENST00000495716 1231 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC108941.1-201ENST00000502853 530 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN20P56880 SNORA31.9-201ENST00000516429 84 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CLDN20P56880 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 MTCO1P49-201ENST00000523429 802 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN20P56880 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.84□□□□□ -1.79
CLDN20P56880 AL109766.1-201ENST00000555080 552 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN20P56880 AL133457.1-201ENST00000564251 987 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC141257.3-201ENST00000572906 215 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 LARP7P2-201ENST00000575306 125 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN20P56880 MIR3915-201ENST00000578518 97 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN20P56880 MIR6798-201ENST00000612887 67 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC009090.3-201ENST00000616553 565 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 AC127502.3-201ENST00000636170 1206 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms