Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CYCSP4-201ENST00000429682 331 ntBASIC3.84□□□□□ -1.79
VCPP55072 UBE2V1P1-201ENST00000430836 445 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.84□□□□□ -1.79
VCPP55072 SNORD105B-201ENST00000458770 79 ntBASIC3.84□□□□□ -1.79
VCPP55072 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.84□□□□□ -1.79
VCPP55072 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.84□□□□□ -1.79
VCPP55072 NAMPTP2-201ENST00000505629 1115 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.84□□□□□ -1.79
VCPP55072 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.84□□□□□ -1.79
VCPP55072 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.84□□□□□ -1.79
VCPP55072 AC021146.1-201ENST00000511202 716 ntBASIC3.84□□□□□ -1.79
VCPP55072 MTCO3P27-201ENST00000514397 196 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC112198.4-201ENST00000515450 351 ntBASIC3.84□□□□□ -1.79
VCPP55072 HIGD1AP3-201ENST00000515857 278 ntBASIC3.84□□□□□ -1.79
VCPP55072 RNU2-27P-201ENST00000516185 142 ntBASIC3.84□□□□□ -1.79
VCPP55072 RN7SKP96-201ENST00000516948 297 ntBASIC3.84□□□□□ -1.79
VCPP55072 OR7E13P-201ENST00000526052 910 ntBASIC3.84□□□□□ -1.79
VCPP55072 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.84□□□□□ -1.79
VCPP55072 AC011611.1-201ENST00000552179 197 ntBASIC3.84□□□□□ -1.79
VCPP55072 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC020914.6-201ENST00000594327 272 ntBASIC3.84□□□□□ -1.79
VCPP55072 YWHAQP7-201ENST00000603536 658 ntBASIC3.84□□□□□ -1.79
VCPP55072 AL163642.2-201ENST00000604722 1019 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC008759.3-201ENST00000613300 508 ntBASIC3.84□□□□□ -1.79
VCPP55072 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 AL590396.2-201ENST00000636511 1041 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC106858.1-201ENST00000637497 429 ntBASIC3.84□□□□□ -1.79
VCPP55072 AL365440.1-201ENST00000436135 2167 ntBASIC3.84□□□□□ -1.79
VCPP55072 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
VCPP55072 MTCO1P24-201ENST00000515438 1558 ntBASIC3.84□□□□□ -1.8
VCPP55072 AL353743.1-202ENST00000431724 1695 ntBASIC3.84□□□□□ -1.8
VCPP55072 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VCPP55072 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VCPP55072 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VCPP55072 AL353746.1-201ENST00000566293 6881 ntBASIC3.84□□□□□ -1.8
VCPP55072 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.83□□□□□ -1.8
VCPP55072 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VCPP55072 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 AL035405.1-201ENST00000400795 710 ntBASIC3.83□□□□□ -1.8
VCPP55072 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 FO393414.1-201ENST00000428697 1184 ntBASIC3.83□□□□□ -1.8
VCPP55072 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 AC127537.2-201ENST00000439258 465 ntBASIC3.83□□□□□ -1.8
VCPP55072 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
VCPP55072 HMGN1P5-201ENST00000448591 263 ntBASIC3.83□□□□□ -1.8
VCPP55072 RPL26P28-201ENST00000451325 435 ntBASIC3.83□□□□□ -1.8
VCPP55072 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.83□□□□□ -1.8
VCPP55072 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 AC099563.1-201ENST00000456086 418 ntBASIC3.83□□□□□ -1.8
VCPP55072 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.83□□□□□ -1.8
VCPP55072 RPL21P8-201ENST00000465083 535 ntBASIC3.83□□□□□ -1.8
VCPP55072 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.83□□□□□ -1.8
VCPP55072 HIGD1AP10-201ENST00000527837 282 ntBASIC3.83□□□□□ -1.8
VCPP55072 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 MIR4325-201ENST00000583049 90 ntBASIC3.83□□□□□ -1.8
VCPP55072 RN7SL622P-201ENST00000585292 275 ntBASIC3.83□□□□□ -1.8
VCPP55072 DNAJC19P3-201ENST00000594491 331 ntBASIC3.83□□□□□ -1.8
VCPP55072 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.83□□□□□ -1.8
VCPP55072 AP003400.6-201ENST00000624698 740 ntBASIC3.83□□□□□ -1.8
VCPP55072 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.83□□□□□ -1.8
VCPP55072 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.83□□□□□ -1.8
VCPP55072 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.83□□□□□ -1.8
VCPP55072 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VCPP55072 OTUD4P1-201ENST00000237841 3067 ntBASIC3.83□□□□□ -1.8
VCPP55072 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.83□□□□□ -1.8
VCPP55072 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.83□□□□□ -1.8
VCPP55072 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
VCPP55072 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VCPP55072 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
VCPP55072 NSRP1P1-201ENST00000444067 1693 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC007823.1-201ENST00000569932 1566 ntBASIC3.82□□□□□ -1.8
VCPP55072 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 AC104446.1-201ENST00000613728 1321 ntBASIC3.82□□□□□ -1.8
VCPP55072 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.82□□□□□ -1.8
VCPP55072 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 AL024507.1-201ENST00000412741 274 ntBASIC3.82□□□□□ -1.8
VCPP55072 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.82□□□□□ -1.8
VCPP55072 ARF4P2-201ENST00000430209 526 ntBASIC3.82□□□□□ -1.8
VCPP55072 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.82□□□□□ -1.8
VCPP55072 AC092170.1-201ENST00000440211 356 ntBASIC3.82□□□□□ -1.8
VCPP55072 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.82□□□□□ -1.8
VCPP55072 GTF2IP12-201ENST00000456547 356 ntBASIC3.82□□□□□ -1.8
VCPP55072 AL136097.1-201ENST00000456945 913 ntBASIC3.82□□□□□ -1.8
VCPP55072 BTF3P5-201ENST00000457252 467 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms