Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR506-201ENST00000384998 124 ntBASIC4.56□□□□□ -1.68
COPB1P53618 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COPB1P53618 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.56□□□□□ -1.68
COPB1P53618 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.56□□□□□ -1.68
COPB1P53618 AL590609.2-201ENST00000421430 368 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC233981.1-201ENST00000423224 461 ntBASIC4.56□□□□□ -1.68
COPB1P53618 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.56□□□□□ -1.68
COPB1P53618 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 EPS15P1-201ENST00000448836 336 ntBASIC4.56□□□□□ -1.68
COPB1P53618 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 RPL5P32-201ENST00000454085 879 ntBASIC4.56□□□□□ -1.68
COPB1P53618 MTCYBP1-201ENST00000454315 1119 ntBASIC4.56□□□□□ -1.68
COPB1P53618 RPS15AP1-201ENST00000457423 391 ntBASIC4.56□□□□□ -1.68
COPB1P53618 ARPC3P2-201ENST00000457786 533 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC109327.1-201ENST00000471666 403 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC107401.1-201ENST00000503426 685 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC093840.1-201ENST00000511599 336 ntBASIC4.56□□□□□ -1.68
COPB1P53618 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.56□□□□□ -1.68
COPB1P53618 GTF2IP22-201ENST00000554443 182 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.56□□□□□ -1.68
COPB1P53618 EIF1P4-201ENST00000572664 335 ntBASIC4.56□□□□□ -1.68
COPB1P53618 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.56□□□□□ -1.68
COPB1P53618 KPNA2P3-201ENST00000584190 848 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.56□□□□□ -1.68
COPB1P53618 AC079089.3-201ENST00000603094 673 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC083899.3-201ENST00000603413 594 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC012360.2-201ENST00000609349 391 ntBASIC4.56□□□□□ -1.68
COPB1P53618 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 AC010678.1-201ENST00000614118 713 ntBASIC4.56□□□□□ -1.68
COPB1P53618 MIR4727-201ENST00000622232 55 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC116563.2-201ENST00000624751 535 ntBASIC4.56□□□□□ -1.68
COPB1P53618 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.56□□□□□ -1.68
COPB1P53618 AL158163.1-201ENST00000603915 1649 ntBASIC4.56□□□□□ -1.68
COPB1P53618 AC018555.1-201ENST00000567548 1980 ntBASIC4.56□□□□□ -1.68
COPB1P53618 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.56□□□□□ -1.68
COPB1P53618 MFSD8-216ENST00000641147 4009 ntBASIC4.56□□□□□ -1.68
COPB1P53618 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.55□□□□□ -1.68
COPB1P53618 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COPB1P53618 Y_RNA.359-201ENST00000365498 102 ntBASIC4.55□□□□□ -1.68
COPB1P53618 RNA5SP88-201ENST00000365560 109 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 SNORA75-201ENST00000384158 137 ntBASIC4.55□□□□□ -1.68
COPB1P53618 MTCO3P31-201ENST00000405526 789 ntBASIC4.55□□□□□ -1.68
COPB1P53618 NCSTNP1-201ENST00000406229 144 ntBASIC4.55□□□□□ -1.68
COPB1P53618 RPL6P29-201ENST00000414863 865 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.55□□□□□ -1.68
COPB1P53618 RPL17P36-201ENST00000420302 549 ntBASIC4.55□□□□□ -1.68
COPB1P53618 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 AL512286.1-201ENST00000439244 400 ntBASIC4.55□□□□□ -1.68
COPB1P53618 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.55□□□□□ -1.68
COPB1P53618 MTCO2P3-201ENST00000442543 421 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 NDUFA5P7-201ENST00000452914 242 ntBASIC4.55□□□□□ -1.68
COPB1P53618 USP9YP10-201ENST00000454868 628 ntBASIC4.55□□□□□ -1.68
COPB1P53618 SNRPGP9-201ENST00000456025 225 ntBASIC4.55□□□□□ -1.68
COPB1P53618 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.55□□□□□ -1.68
COPB1P53618 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 RPL31P61-201ENST00000496160 376 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC093824.1-201ENST00000508796 343 ntBASIC4.55□□□□□ -1.68
COPB1P53618 KRT19P6-201ENST00000510983 209 ntBASIC4.55□□□□□ -1.68
COPB1P53618 USP9YP5-201ENST00000511770 630 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 RNA5SP49-201ENST00000516450 115 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC087276.1-201ENST00000529659 480 ntBASIC4.55□□□□□ -1.68
COPB1P53618 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 AC068831.4-201ENST00000556118 109 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.55□□□□□ -1.68
COPB1P53618 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.55□□□□□ -1.68
COPB1P53618 AC087683.1-201ENST00000591187 441 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AP003465.2-201ENST00000602571 373 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC073648.5-201ENST00000603502 305 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AL596327.1-201ENST00000603629 213 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC023813.4-201ENST00000607580 580 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 FAM27D1-201ENST00000612308 341 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC015540.1-201ENST00000615828 501 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AC018755.4-201ENST00000619715 454 ntBASIC4.55□□□□□ -1.68
COPB1P53618 CR392039.4-201ENST00000624968 501 ntBASIC4.55□□□□□ -1.68
COPB1P53618 AP005264.7-201ENST00000625003 745 ntBASIC4.55□□□□□ -1.68
COPB1P53618 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms