Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PABPC1P7-201ENST00000413177 1513 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.84□□□□□ -1.95
GTF2A1P52655 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
GTF2A1P52655 DEFB109C-201ENST00000382575 264 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 DEFB109B-201ENST00000382656 264 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 MIR141-201ENST00000384975 95 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
GTF2A1P52655 AC092447.6-201ENST00000414578 210 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.84□□□□□ -1.95
GTF2A1P52655 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.84□□□□□ -1.95
GTF2A1P52655 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.84□□□□□ -1.95
GTF2A1P52655 MTATP6P4-201ENST00000427725 675 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 AC073063.1-201ENST00000434352 607 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 VN1R34P-201ENST00000447387 883 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 RAB28P3-201ENST00000448325 597 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 RBMY2UP-201ENST00000453474 324 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.84□□□□□ -1.95
GTF2A1P52655 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.84□□□□□ -1.95
GTF2A1P52655 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
GTF2A1P52655 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
GTF2A1P52655 SNORA70.17-201ENST00000516449 133 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.84□□□□□ -1.95
GTF2A1P52655 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.84□□□□□ -1.95
GTF2A1P52655 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.84□□□□□ -1.95
GTF2A1P52655 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.84□□□□□ -1.95
GTF2A1P52655 AL161756.2-201ENST00000604597 246 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 BX664608.1-201ENST00000610519 487 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 MIR378J-201ENST00000611988 109 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 AC008083.4-201ENST00000615076 444 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 CR392039.4-201ENST00000624968 501 ntBASIC2.84□□□□□ -1.95
GTF2A1P52655 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
GTF2A1P52655 AC026241.1-201ENST00000517873 2142 ntBASIC2.84□□□□□ -1.96
GTF2A1P52655 AC093010.3-201ENST00000570269 15214 ntBASIC2.84□□□□□ -1.96
GTF2A1P52655 GABRG2-229ENST00000641017 3628 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
GTF2A1P52655 ZNF285B-201ENST00000561698 1767 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AL139276.1-201ENST00000311910 1001 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AL359837.1-201ENST00000381357 287 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AC110754.1-201ENST00000399740 601 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 CKS1BP5-201ENST00000434172 273 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.83□□□□□ -1.96
GTF2A1P52655 RPL26P28-201ENST00000451325 435 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.83□□□□□ -1.96
GTF2A1P52655 RPS4XP6-201ENST00000477670 797 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 RPL7P38-201ENST00000488396 739 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AC090543.1-201ENST00000492168 485 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
GTF2A1P52655 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AL133271.1-201ENST00000538229 291 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AC121758.2-201ENST00000553271 193 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
GTF2A1P52655 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AL161734.1-201ENST00000609720 557 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 MIR6895-201ENST00000613497 78 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AL121772.2-201ENST00000614331 297 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.83□□□□□ -1.96
GTF2A1P52655 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AC010338.1-201ENST00000621823 717 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GTF2A1P52655 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
GTF2A1P52655 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.83□□□□□ -1.96
GTF2A1P52655 AC135776.4-201ENST00000624300 1904 ntBASIC2.83□□□□□ -1.96
GTF2A1P52655 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.83□□□□□ -1.96
GTF2A1P52655 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
GTF2A1P52655 RNU6-335P-201ENST00000364563 113 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
GTF2A1P52655 AL355379.1-201ENST00000405542 640 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 RNU4-65P-201ENST00000410473 140 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.82□□□□□ -1.96
GTF2A1P52655 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.82□□□□□ -1.96
GTF2A1P52655 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.82□□□□□ -1.96
GTF2A1P52655 AC004975.1-201ENST00000428733 208 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.82□□□□□ -1.96
GTF2A1P52655 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.82□□□□□ -1.96
GTF2A1P52655 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.82□□□□□ -1.96
GTF2A1P52655 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.82□□□□□ -1.96
GTF2A1P52655 DSTNP2-201ENST00000504533 515 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AC107222.1-201ENST00000510899 637 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
GTF2A1P52655 AL355836.1-201ENST00000555951 870 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.82□□□□□ -1.96
GTF2A1P52655 AC034105.3-201ENST00000565294 442 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
GTF2A1P52655 RN7SL339P-201ENST00000580597 296 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 MIR4443-201ENST00000585052 53 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AL645944.1-201ENST00000603857 493 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AL451086.1-201ENST00000605596 223 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 AC009093.8-201ENST00000641769 292 ntBASIC2.82□□□□□ -1.96
GTF2A1P52655 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
GTF2A1P52655 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms