Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HLA-DMBP28068 MTND5P24-201ENST00000438892 1767 ntBASIC2.45□□□□□ -2.02
HLA-DMBP28068 MTND4P34-201ENST00000572715 1371 ntBASIC2.45□□□□□ -2.02
HLA-DMBP28068 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMBP28068 AF117829.1-206ENST00000621883 3802 ntBASIC2.45□□□□□ -2.02
HLA-DMBP28068 AL049781.1-201ENST00000623195 3585 ntBASIC2.45□□□□□ -2.02
HLA-DMBP28068 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DMBP28068 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DMBP28068 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 RNU6-152P-201ENST00000384037 107 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 TAF9BP1-201ENST00000396646 746 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 EIF5P1-201ENST00000400019 1231 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 MIR887-201ENST00000401258 79 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 RN7SKP111-201ENST00000410349 271 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 RN7SKP58-201ENST00000411010 305 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC007899.1-201ENST00000412776 775 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 RPL32P35-201ENST00000415214 394 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 VDAC1P3-201ENST00000434069 851 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 ATP5C1P1-201ENST00000441945 895 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 RPL7P52-201ENST00000449200 742 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC104308.1-201ENST00000454621 333 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AP002345.1-201ENST00000456493 928 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 RPS15AP1-201ENST00000457423 391 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 NF1P3-201ENST00000457709 450 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 snoU13.24-201ENST00000458998 104 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 SNORA31.26-201ENST00000517250 137 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC007536.1-201ENST00000533382 349 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 BNIP3P7-201ENST00000605641 516 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC006023.2-201ENST00000609916 167 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC024023.1-201ENST00000624530 922 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC073476.4-201ENST00000628409 72 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 AC119674.1-220ENST00000641502 1048 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMBP28068 API5P2-201ENST00000397055 1498 ntBASIC2.44□□□□□ -2.02
HLA-DMBP28068 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMBP28068 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMBP28068 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 SNORA38.1-201ENST00000364172 131 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMBP28068 MIR7-1-201ENST00000384871 110 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 MIR483-201ENST00000385070 76 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 RNA5SP120-201ENST00000410900 112 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC023128.2-201ENST00000420880 1223 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC005517.2-201ENST00000424673 553 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 HIGD1AP11-201ENST00000438361 280 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMBP28068 MTND3P6-201ENST00000485242 339 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC104687.1-201ENST00000485829 412 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC016065.2-201ENST00000514530 444 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 ZNF415P1-201ENST00000582279 1166 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMBP28068 AC078899.3-201ENST00000599065 212 ntBASIC2.43□□□□□ -2.02
HLA-DMBP28068 NTAN1P1-201ENST00000603150 646 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms