Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.94□□□□□ -1.46
LIG1P18858 RNA5SP92-201ENST00000516437 110 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.94□□□□□ -1.46
LIG1P18858 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.94□□□□□ -1.46
LIG1P18858 AL049779.2-201ENST00000553847 315 ntBASIC5.94□□□□□ -1.46
LIG1P18858 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.94□□□□□ -1.46
LIG1P18858 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.94□□□□□ -1.46
LIG1P18858 SULT1C2P1-202ENST00000562418 459 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC034105.3-201ENST00000565294 442 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC011468.4-201ENST00000603942 409 ntBASIC5.94□□□□□ -1.46
LIG1P18858 SUMO2P15-201ENST00000604285 278 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC008966.2-201ENST00000606157 453 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.94□□□□□ -1.46
LIG1P18858 DISC2.1-201ENST00000612827 205 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AL133173.2-201ENST00000614270 90 ntBASIC5.94□□□□□ -1.46
LIG1P18858 BMS1P21-201ENST00000634565 365 ntBASIC5.94□□□□□ -1.46
LIG1P18858 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LIG1P18858 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.94□□□□□ -1.46
LIG1P18858 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LIG1P18858 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIG1P18858 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIG1P18858 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.93□□□□□ -1.46
LIG1P18858 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIG1P18858 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIG1P18858 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIG1P18858 OR5J1P-201ENST00000313544 939 ntBASIC5.93□□□□□ -1.46
LIG1P18858 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LIG1P18858 RNU6-359P-201ENST00000365466 108 ntBASIC5.93□□□□□ -1.46
LIG1P18858 RAB28P1-201ENST00000411517 641 ntBASIC5.93□□□□□ -1.46
LIG1P18858 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.93□□□□□ -1.46
LIG1P18858 MTCO3P12-201ENST00000416718 547 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.93□□□□□ -1.46
LIG1P18858 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 RPS15AP17-201ENST00000470598 390 ntBASIC5.93□□□□□ -1.46
LIG1P18858 RN7SL30P-201ENST00000488416 306 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
LIG1P18858 AC005912.1-201ENST00000495392 255 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 AC024558.1-201ENST00000505008 528 ntBASIC5.93□□□□□ -1.46
LIG1P18858 HIGD1AP14-201ENST00000507617 282 ntBASIC5.93□□□□□ -1.46
LIG1P18858 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 AC006427.1-201ENST00000514359 712 ntBASIC5.93□□□□□ -1.46
LIG1P18858 RNU6-277P-201ENST00000516272 106 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AF186190.1-201ENST00000517470 480 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.93□□□□□ -1.46
LIG1P18858 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.93□□□□□ -1.46
LIG1P18858 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.93□□□□□ -1.46
LIG1P18858 AC017100.2-201ENST00000584628 355 ntBASIC5.93□□□□□ -1.46
LIG1P18858 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 BNIP3P22-201ENST00000593399 556 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AC007687.1-201ENST00000602704 304 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AL512329.2-201ENST00000607350 548 ntBASIC5.93□□□□□ -1.46
LIG1P18858 SDR42E1P1-201ENST00000611327 477 ntBASIC5.93□□□□□ -1.46
LIG1P18858 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.93□□□□□ -1.46
LIG1P18858 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIG1P18858 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIG1P18858 AC000123.3-201ENST00000624029 4975 ntBASIC5.93□□□□□ -1.46
LIG1P18858 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.93□□□□□ -1.46
LIG1P18858 OR55B1P-203ENST00000641518 2602 ntBASIC5.93□□□□□ -1.46
LIG1P18858 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG1P18858 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 AC011493.1-201ENST00000596753 1632 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG1P18858 AP002907.1-201ENST00000606361 1430 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AC022031.1-201ENST00000585985 2593 ntBASIC5.92□□□□□ -1.46
LIG1P18858 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 AC000374.1-201ENST00000434698 1745 ntBASIC5.92□□□□□ -1.46
LIG1P18858 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.92□□□□□ -1.46
LIG1P18858 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.92□□□□□ -1.46
LIG1P18858 Y_RNA.46-201ENST00000362695 102 ntBASIC5.92□□□□□ -1.46
LIG1P18858 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 RNU6-952P-201ENST00000391164 108 ntBASIC5.92□□□□□ -1.46
LIG1P18858 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG1P18858 MRPL42P2-201ENST00000403169 426 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG1P18858 MTCO3P46-201ENST00000425787 232 ntBASIC5.92□□□□□ -1.46
LIG1P18858 GAPDHP58-201ENST00000438477 1006 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG1P18858 USP9YP15-201ENST00000442391 422 ntBASIC5.92□□□□□ -1.46
LIG1P18858 CYCSP24-201ENST00000445119 316 ntBASIC5.92□□□□□ -1.46
LIG1P18858 RPS15AP1-201ENST00000457423 391 ntBASIC5.92□□□□□ -1.46
LIG1P18858 RPS18P6-201ENST00000476880 458 ntBASIC5.92□□□□□ -1.46
LIG1P18858 RNA5SP34-201ENST00000516887 130 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG1P18858 HMGB3P26-201ENST00000560051 582 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.92□□□□□ -1.46
LIG1P18858 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG1P18858 VN1R84P-201ENST00000593697 235 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG1P18858 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 AC093838.1-201ENST00000613014 469 ntBASIC5.92□□□□□ -1.46
LIG1P18858 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 BX005214.3-202ENST00000619809 325 ntBASIC5.92□□□□□ -1.46
LIG1P18858 AC009161.2-201ENST00000624626 138 ntBASIC5.92□□□□□ -1.46
LIG1P18858 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.92□□□□□ -1.46
LIG1P18858 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
LIG1P18858 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms