Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC046144.1-201ENST00000478559 1853 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 MTND4P16-201ENST00000466108 1367 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DOAP06340 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC116667.1-201ENST00000604855 2072 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 RNU6-259P-201ENST00000383999 107 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 BTF3P7-201ENST00000407097 488 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 MIR1284-201ENST00000408337 120 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 IPMKP1-201ENST00000425988 855 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 MTND1P2-201ENST00000430604 821 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AL365184.2-201ENST00000431139 435 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 UBE2V1P8-201ENST00000437166 265 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC004865.1-201ENST00000442276 1003 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC010307.1-201ENST00000467206 836 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 MTND6P6-201ENST00000478031 263 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 COX6B1P6-201ENST00000522347 255 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 MTND4LP18-201ENST00000526864 291 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 TRAV15-201ENST00000556680 249 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 SNORD91B-202ENST00000608459 222 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AL359314.1-201ENST00000616913 261 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 MIR6875-201ENST00000617506 72 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AL157786.1-207ENST00000627771 695 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 OR5H6-203ENST00000642105 978 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DOAP06340 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DOAP06340 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 USP9YP4-201ENST00000424401 1745 ntBASIC4.94□□□□□ -1.62
HLA-DOAP06340 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DOAP06340 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DOAP06340 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 MTCO1P23-201ENST00000415223 1526 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 ASNSP1-204ENST00000641977 1664 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 RNU5F-7P-201ENST00000363696 115 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 RNU4-91P-201ENST00000364778 135 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 RNA5SP88-201ENST00000365560 109 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 MIR134-201ENST00000385258 73 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 RNU6-272P-201ENST00000411028 104 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 Z97055.1-201ENST00000419730 712 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 OR8F1P-201ENST00000425243 930 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 RPL7P2-201ENST00000427639 268 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 RPS24P8-201ENST00000431490 402 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AL022238.1-201ENST00000442557 355 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 EEF1E1P1-201ENST00000446998 430 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC005229.2-201ENST00000456995 399 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 IGHV3-32-201ENST00000519182 355 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AP001189.2-201ENST00000527320 189 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC122134.1-201ENST00000565664 1104 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 SEPT7P9-203ENST00000604116 343 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC005332.6-201ENST00000613178 446 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 AL356596.1-201ENST00000624230 379 ntBASIC4.93□□□□□ -1.62
HLA-DOAP06340 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DOAP06340 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DOAP06340 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 Z82217.1-201ENST00000625157 8149 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms