Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC012417.1-201ENST00000582307 1039 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC119751.7-201ENST00000600494 245 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 WISP1-OT1-201ENST00000602893 642 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AL451044.1-201ENST00000604867 238 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 RNU1-30P-201ENST00000606575 163 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC138965.3-201ENST00000623875 498 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC116563.2-201ENST00000624751 535 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAPGEF3O95398 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAPGEF3O95398 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC025125.1-201ENST00000624743 1922 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 RNU6-115P-201ENST00000364310 107 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 MIR1289-1-201ENST00000408836 144 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 NPM1P11-201ENST00000417106 855 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 MED14P1-201ENST00000430517 648 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC241584.1-201ENST00000438469 1241 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC092013.1-201ENST00000438795 332 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 RPL7P38-201ENST00000488396 739 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 HMGB3P13-201ENST00000511263 607 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 RPL12P22-201ENST00000519073 490 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAPGEF3O95398 HIGD1AP10-201ENST00000527837 282 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 RN7SKP299-201ENST00000606679 301 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AL355816.1-201ENST00000607951 118 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AL354760.1-201ENST00000608357 643 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 MIR8058-201ENST00000615737 89 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AL031667.3-201ENST00000620124 655 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC140113.4-201ENST00000622087 222 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RAPGEF3O95398 AC005332.5-201ENST00000591222 2919 ntBASIC5.91□□□□□ -1.46
RAPGEF3O95398 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RAPGEF3O95398 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 AL672167.1-204ENST00000641875 3017 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 MT-TH-201ENST00000387441 69 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC068533.2-201ENST00000411872 306 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 GNG5P5-201ENST00000420444 220 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC233981.1-201ENST00000423224 461 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 RPS26P2-201ENST00000440331 348 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 RPL7L1P1-201ENST00000448259 785 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 RPL23AP35-201ENST00000451906 501 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 NF1P3-201ENST00000457709 450 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 RPL7P23-201ENST00000493874 747 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 KLRA1P-201ENST00000503499 986 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC093281.2-201ENST00000510153 597 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 MTCO2P32-201ENST00000514865 403 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 MTCYBP20-201ENST00000524239 1129 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC068993.1-201ENST00000546724 589 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 TRAV15-201ENST00000556680 249 ntBASIC5.9□□□□□ -1.46
RAPGEF3O95398 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.9□□□□□ -1.46
RAPGEF3O95398 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RAPGEF3O95398 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.9□□□□□ -1.47
RAPGEF3O95398 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RAPGEF3O95398 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
RAPGEF3O95398 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RAPGEF3O95398 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAPGEF3O95398 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AP001642.1-201ENST00000624727 2117 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAPGEF3O95398 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAPGEF3O95398 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms