Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SNORA74D-201ENST00000516404 141 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 RN7SKP234-201ENST00000517173 224 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 AC090136.1-201ENST00000520009 240 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.2□□□□□ -2.06
SSSCA1O60232 HSPE1P20-201ENST00000538133 289 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SSSCA1O60232 AC090695.1-201ENST00000561269 1222 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 RPL23AP88-201ENST00000605759 454 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SSSCA1O60232 AL390240.1-201ENST00000612950 384 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 AC068831.8-201ENST00000620171 435 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 AC116563.2-201ENST00000624751 535 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSSCA1O60232 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSSCA1O60232 AC010733.2-201ENST00000589496 5702 ntBASIC2.2□□□□□ -2.06
SSSCA1O60232 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SSSCA1O60232 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.19□□□□□ -2.06
SSSCA1O60232 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SSSCA1O60232 SNORA63.1-201ENST00000362493 131 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 RNU6-851P-201ENST00000384565 107 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 MIR1193-201ENST00000408109 78 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC007064.3-201ENST00000422608 359 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC005326.1-201ENST00000429197 123 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.19□□□□□ -2.06
SSSCA1O60232 XKRYP6-201ENST00000440468 1116 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 XKRYP3-201ENST00000442113 1116 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC112653.1-201ENST00000443851 386 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.19□□□□□ -2.06
SSSCA1O60232 UBBP3-201ENST00000445497 241 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 RPL23AP20-201ENST00000447965 421 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 NF1P3-201ENST00000457709 450 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.19□□□□□ -2.06
SSSCA1O60232 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AC006445.1-201ENST00000491925 405 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 RPL21P131-201ENST00000497298 483 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AC023632.4-201ENST00000517783 191 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SSSCA1O60232 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.19□□□□□ -2.06
SSSCA1O60232 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.19□□□□□ -2.06
SSSCA1O60232 MIR4635-201ENST00000583759 79 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC060766.3-201ENST00000591442 263 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AC019131.2-201ENST00000609071 870 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
SSSCA1O60232 MIR7112-201ENST00000616126 65 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AP000676.4-201ENST00000624659 623 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 AC096644.4-201ENST00000563417 2912 ntBASIC2.19□□□□□ -2.06
SSSCA1O60232 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.19□□□□□ -2.06
SSSCA1O60232 AC109315.1-201ENST00000584143 1347 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AL136520.1-201ENST00000600311 1322 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 RNA5SP479-201ENST00000364858 117 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SSSCA1O60232 RNU1-109P-201ENST00000383960 147 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 AC004022.2-201ENST00000413824 193 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 EI24P1-201ENST00000416584 867 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 USP9YP36-201ENST00000424581 829 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.18□□□□□ -2.06
SSSCA1O60232 RPL23AP58-201ENST00000440453 469 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AL591503.2-201ENST00000442314 1005 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC112492.1-201ENST00000449607 712 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 CALM1P2-201ENST00000452941 448 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 CACYBPP2-201ENST00000453625 678 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC027673.1-201ENST00000456245 405 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AL136126.1-201ENST00000473603 402 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AIG1P1-201ENST00000503376 148 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 AC117522.3-201ENST00000507974 584 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSSCA1O60232 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.18□□□□□ -2.06
SSSCA1O60232 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 AC100870.1-201ENST00000522035 505 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 OR8L1P-201ENST00000534005 955 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC007448.1-201ENST00000582714 234 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 BDH2P1-201ENST00000602288 736 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.18□□□□□ -2.06
SSSCA1O60232 AC022079.2-201ENST00000619739 566 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.18□□□□□ -2.06
SSSCA1O60232 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SSSCA1O60232 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.18□□□□□ -2.06
SSSCA1O60232 RNF6P1-201ENST00000444889 1784 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.18□□□□□ -2.06
SSSCA1O60232 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SSSCA1O60232 AC233263.6-201ENST00000631132 1963 ntBASIC2.18□□□□□ -2.06
SSSCA1O60232 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.17□□□□□ -2.06
SSSCA1O60232 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSSCA1O60232 AC073055.1-201ENST00000456901 1621 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSSCA1O60232 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms