Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL451074.6-201ENST00000608512 729 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AL591424.2-201ENST00000617023 128 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC073968.1-201ENST00000618594 637 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AL031985.3-201ENST00000565390 2449 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC097504.1-201ENST00000515103 2415 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 SNRPEP3-201ENST00000338402 276 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 RNU6-339P-201ENST00000384310 107 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MIR506-201ENST00000384998 124 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MIR513B-201ENST00000385136 84 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MIR513A2-201ENST00000385249 127 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MIR1183-201ENST00000408856 89 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AL445584.1-201ENST00000431451 330 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AL050321.1-201ENST00000432363 400 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC092427.1-201ENST00000439177 601 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 CR769776.1-201ENST00000441254 787 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 OR9M1P-201ENST00000459641 921 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 PPIAP15-201ENST00000479662 484 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC068305.1-201ENST00000497406 726 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC025554.1-201ENST00000505641 188 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 RNA5SP309-201ENST00000516670 106 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC091516.1-201ENST00000549191 703 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MTND1P24-201ENST00000552175 861 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC090695.1-201ENST00000561269 1222 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC091057.2-201ENST00000602594 792 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC034229.4-201ENST00000607861 441 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC131235.4-201ENST00000609288 620 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AC092650.2-201ENST00000619984 902 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 AL139089.1-201ENST00000620372 975 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 CR392039.5-201ENST00000623201 510 ntBASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPIPA3F8WFD2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC068254.2-201ENST00000623938 3577 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 MIR200C-201ENST00000384980 68 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC068533.2-201ENST00000411872 306 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 FNDC3CP-201ENST00000420795 1155 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC093698.1-201ENST00000423843 571 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 MTCO2P17-201ENST00000424336 677 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 VN1R34P-201ENST00000447387 883 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 VN1R40P-201ENST00000455196 941 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 HMGB3P30-201ENST00000457863 606 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC108941.1-201ENST00000502853 530 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms