Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC009220.1-201ENST00000451614 275 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 Z82190.1-201ENST00000454534 490 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 SNRPFP4-201ENST00000456366 242 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AP000797.1-201ENST00000478870 387 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC021382.1-201ENST00000483523 359 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 Y_RNA.695-201ENST00000516715 107 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC025881.1-201ENST00000518851 512 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 RAB9BP1-201ENST00000519581 626 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 SETP2-201ENST00000553886 926 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC022916.3-201ENST00000592961 742 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AL358072.1-201ENST00000604156 575 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC011451.2-201ENST00000604303 598 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 BCRP9-201ENST00000605312 388 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC064807.4-201ENST00000607201 407 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AL391497.1-201ENST00000608671 547 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AL592182.3-201ENST00000642132 3304 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 MTND4P4-201ENST00000439033 1366 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 MAPK10-286ENST00000641208 8747 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU4-91P-201ENST00000364778 135 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU6-712P-201ENST00000410558 100 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC016397.1-201ENST00000412463 242 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC092447.6-201ENST00000414578 210 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 CYCSP46-201ENST00000423569 204 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 OR8F1P-201ENST00000425243 930 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 DNAJC19P7-201ENST00000428811 344 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC068287.1-201ENST00000430283 295 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 USP9YP7-201ENST00000436723 430 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 RPL7P36-201ENST00000444633 681 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 ARL2BPP10-201ENST00000446487 531 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 COX6CP12-201ENST00000446748 202 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 EPS15P1-201ENST00000448836 336 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 USP9YP32-201ENST00000452432 430 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 RPS4XP18-201ENST00000495480 763 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AK3P4-201ENST00000504283 583 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 MTCO3P28-201ENST00000513351 515 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AP004371.1-201ENST00000525240 214 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 CR383656.7-201ENST00000548164 174 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC015912.2-201ENST00000571053 181 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC068276.1-201ENST00000605793 379 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC091965.4-201ENST00000607691 587 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AL590099.1-201ENST00000615276 138 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AC079597.1-201ENST00000624306 508 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 U3.53-201ENST00000628922 216 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AL365440.1-201ENST00000436135 2167 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 AL672167.1-203ENST00000641299 2975 ntBASIC5.16□□□□□ -1.58
COL4A3BPQ9Y5P4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF137P-201ENST00000456718 1920 ntBASIC5.15□□□□□ -1.58
COL4A3BPQ9Y5P4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
COL4A3BPQ9Y5P4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.15□□□□□ -1.58
COL4A3BPQ9Y5P4 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 SNORA71.2-201ENST00000364941 134 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MIR141-201ENST00000384975 95 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AC099677.1-201ENST00000420575 175 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 CENPIP1-201ENST00000425713 902 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 UBE2V1P13-201ENST00000436983 439 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 GSTA7P-201ENST00000438425 448 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms