Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC008162.1-201ENST00000604718 254 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.1-201ENST00000604752 252 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.5-201ENST00000605253 252 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.12-201ENST00000605291 253 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.8-201ENST00000605353 252 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.7-201ENST00000605823 252 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL355073.2-201ENST00000612106 557 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL020991.1-201ENST00000612314 373 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 YWHAEP7-203ENST00000622054 312 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 MIR3662-201ENST00000637030 95 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC114774.1-201ENST00000507410 1770 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC007938.2-201ENST00000604666 2634 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RNU6-335P-201ENST00000364563 113 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 SNORA23-201ENST00000365128 182 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RNU6-74P-201ENST00000384235 107 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RNY3P14-201ENST00000384309 102 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RNU6-171P-201ENST00000384354 107 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC068050.1-201ENST00000394891 380 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RPS3AP24-201ENST00000407896 734 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 OR51A5P-201ENST00000415429 942 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 BX276092.6-201ENST00000430476 250 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 USP12PX-201ENST00000432383 1057 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL162388.1-201ENST00000450912 352 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RPL12P39-201ENST00000455456 496 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 BX276092.8-201ENST00000455722 250 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 RN7SL51P-201ENST00000468230 285 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC078785.3-201ENST00000476607 425 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC126389.1-201ENST00000477436 290 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC116562.3-201ENST00000506136 177 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC068587.5-201ENST00000528506 175 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC093012.1-202ENST00000549403 582 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 ARL2BPP2-201ENST00000550907 489 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL121579.1-201ENST00000555129 305 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 NCAPGP2-201ENST00000557911 754 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL513327.3-201ENST00000602618 469 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL512329.2-201ENST00000607350 548 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL118522.2-201ENST00000616045 615 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AL354950.2-201ENST00000617939 290 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC018445.2-201ENST00000622987 260 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 U6.114-201ENST00000636407 96 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC004817.4-201ENST00000602396 3625 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 AC009962.1-201ENST00000567327 3813 ntBASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRAIPQ9BWF2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 U3.7-201ENST00000363668 216 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RN7SKP6-201ENST00000364795 319 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 MIR551A-201ENST00000385042 96 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RNA5SP91-201ENST00000390902 119 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RNU2-36P-201ENST00000410361 191 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms