Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 RPL7L1P13-201ENST00000511702 739 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 SNORA31.1-201ENST00000515993 133 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 SNORA31.5-201ENST00000516190 133 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 OR4A45P-201ENST00000529954 901 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 GTF2IP22-201ENST00000554443 182 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AP000787.2-201ENST00000604432 568 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC004696.1-201ENST00000614345 607 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 AC006378.2-201ENST00000623178 2476 ntBASIC2.29□□□□□ -2.04
AP1S3Q96PC3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.29□□□□□ -2.04
AP1S3Q96PC3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AF117829.1-206ENST00000621883 3802 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC091564.4-201ENST00000533934 2194 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 OR1S2-201ENST00000302592 978 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 SNORA5A-201ENST00000384111 134 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 MTND4P13-201ENST00000402078 1023 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 RNU4-65P-201ENST00000410473 140 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 MTCO3P4-201ENST00000419236 787 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 UBE2D3P2-201ENST00000424409 445 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AL035246.1-201ENST00000433554 1255 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 XKRYP6-201ENST00000440468 1116 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 RABEPKP1-201ENST00000440529 1026 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 XKRYP3-201ENST00000442113 1116 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 RPL21P23-201ENST00000446654 460 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 ELOCP23-201ENST00000452014 332 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 PRDX3P4-201ENST00000470828 747 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC010301.1-201ENST00000473936 355 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC017015.1-201ENST00000477387 286 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 RN7SL633P-201ENST00000488974 297 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 RNA5SP76-201ENST00000516277 87 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC090695.1-201ENST00000561269 1222 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 MIR548Y-201ENST00000582739 110 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 MIR4443-201ENST00000585052 53 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC083760.1-201ENST00000589621 670 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC002076.2-201ENST00000617362 122 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AP003122.6-201ENST00000623831 495 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 AC079228.1-201ENST00000624774 1049 ntBASIC2.28□□□□□ -2.04
AP1S3Q96PC3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
AP1S3Q96PC3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 RPL23AP57-201ENST00000332361 466 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 RN7SKP227-201ENST00000364445 330 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 RNU6-185P-201ENST00000384421 107 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 BTBD10P2-201ENST00000404779 676 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 RN7SKP263-201ENST00000411194 309 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 CASKP1-201ENST00000412870 582 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 HMGN2P30-201ENST00000423237 256 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 RPL31P20-201ENST00000449593 360 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 HMGB1P26-201ENST00000452520 628 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 PLGLA-201ENST00000465668 449 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 RPL7P23-201ENST00000493874 747 ntBASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.27□□□□□ -2.05
AP1S3Q96PC3 AC110794.1-201ENST00000505816 425 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms