Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC016907.1-201ENST00000419483 435 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 OFD1P18Y-201ENST00000420889 959 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 PSMA2P3-201ENST00000429685 675 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 COX6B1P7-201ENST00000430845 235 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 LARP1BP3-201ENST00000437229 869 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 SNRPEP7-201ENST00000438350 220 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AL031584.1-201ENST00000447169 754 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AL162151.2-201ENST00000448875 158 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RPL31P50-201ENST00000471002 296 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 ARL4AP1-201ENST00000503220 705 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC006499.5-201ENST00000505037 514 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 MTND5P13-201ENST00000513046 1079 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 HIGD1AP10-201ENST00000527837 282 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC092851.1-201ENST00000535964 478 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC141257.3-201ENST00000572906 215 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 MIR4429-201ENST00000580105 73 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RN7SL600P-201ENST00000581811 299 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC006130.2-201ENST00000586202 326 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 BNIP3P22-201ENST00000593399 556 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AP001981.2-201ENST00000603241 418 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AL161729.3-201ENST00000603533 673 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC010680.4-201ENST00000605334 543 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC008966.2-201ENST00000606157 453 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC105429.2-201ENST00000610567 517 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC090116.1-201ENST00000615679 446 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 MIR8069-1-201ENST00000616627 86 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 MIR8069-2-201ENST00000621412 86 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC021242.1-201ENST00000507315 2035 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AL022578.1-201ENST00000439330 1433 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC083843.3-201ENST00000623679 2186 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 SNORD82-201ENST00000365530 70 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL356095.1-201ENST00000417217 199 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MORF4L1P6-201ENST00000418771 268 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL512649.1-201ENST00000428997 581 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MTND5P14-201ENST00000441481 1267 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MTND1P29-201ENST00000448112 647 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MTCO1P27-201ENST00000448269 226 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 RPL35AP15-201ENST00000468042 339 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 RN7SL132P-201ENST00000478131 296 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC020890.1-201ENST00000491837 504 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC082651.2-201ENST00000496833 166 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 OR2A20P-203ENST00000498397 1268 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC093809.1-201ENST00000509155 340 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 KCTD9P2-201ENST00000512203 1013 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC005798.1-201ENST00000513715 387 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms