Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC092451.1-201ENST00000480211 153 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC092045.1-201ENST00000495716 1231 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC108941.1-201ENST00000502853 530 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC026412.2-201ENST00000512270 1075 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 IGHV3-32-201ENST00000519182 355 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 CBX3P5-201ENST00000552017 521 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 BNIP3P40-201ENST00000596017 556 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RPP40P2-201ENST00000603596 712 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC023158.2-201ENST00000614876 543 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC112200.1-201ENST00000625015 234 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 MTCO1P23-201ENST00000415223 1526 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL031985.3-201ENST00000565390 2449 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZNF29P-201ENST00000225587 168 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 SNORA31-201ENST00000362607 130 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 SNORD35B-201ENST00000363660 87 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 SNORA51.2-201ENST00000364595 132 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL359837.1-201ENST00000381357 287 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ARF4P3-201ENST00000397387 509 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL583834.1-201ENST00000406943 343 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 OR5BE1P-201ENST00000425977 939 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL691449.1-201ENST00000426570 421 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC006548.1-201ENST00000427470 102 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 RPL23AP76-201ENST00000441860 458 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 RPL5P24-201ENST00000463742 885 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC011979.1-201ENST00000472300 483 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 OR5D17P-201ENST00000531492 978 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC005832.3-201ENST00000537929 631 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC125611.1-201ENST00000549563 229 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL132657.2-201ENST00000564417 358 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC022968.1-201ENST00000567372 442 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC025627.2-201ENST00000576220 160 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 BNIP3P24-201ENST00000593398 557 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL451044.1-201ENST00000604867 238 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL451086.1-201ENST00000605596 223 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC016877.3-201ENST00000606778 504 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC090912.3-201ENST00000609775 533 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC069209.1-201ENST00000619282 651 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 MIR6500-201ENST00000622700 86 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AC120349.2-201ENST00000625002 298 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 CR381572.1-201ENST00000625098 102 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 U6.101-201ENST00000637707 76 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 OR5BE1P-202ENST00000641168 1176 ntBASIC4.1□□□□□ -1.75
PRPF39Q86UA1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF39Q86UA1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 BDP1P-201ENST00000582658 1990 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms