Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC4P56524 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.33□□□□□ -1.72
HDAC4P56524 CYCSP29-201ENST00000533731 318 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC4P56524 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.33□□□□□ -1.72
HDAC4P56524 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.33□□□□□ -1.72
HDAC4P56524 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.33□□□□□ -1.72
HDAC4P56524 AC008015.1-201ENST00000555505 465 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC4P56524 AC079171.1-201ENST00000568788 914 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 AC135628.1-201ENST00000568867 534 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 KPNA2P3-201ENST00000584190 848 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC4P56524 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.33□□□□□ -1.72
HDAC4P56524 MIR7151-201ENST00000617477 60 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC4P56524 AC103858.2-201ENST00000621471 543 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 MIR7702-201ENST00000621931 59 ntBASIC4.33□□□□□ -1.72
HDAC4P56524 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.33□□□□□ -1.72
HDAC4P56524 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HDAC4P56524 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC4P56524 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC4P56524 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HDAC4P56524 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.33□□□□□ -1.72
HDAC4P56524 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 SGO1P2-201ENST00000429458 1589 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC005539.1-201ENST00000443768 1479 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC097504.1-201ENST00000515103 2415 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 OR4A15-201ENST00000314706 1035 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 RNU6-251P-201ENST00000363235 104 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HDAC4P56524 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HDAC4P56524 AL356131.1-201ENST00000405826 414 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 RN7SKP177-201ENST00000410567 355 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.32□□□□□ -1.72
HDAC4P56524 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.32□□□□□ -1.72
HDAC4P56524 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 AC005345.1-201ENST00000431868 217 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 ELOCP8-201ENST00000439309 332 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 ELOCP15-201ENST00000442090 332 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
HDAC4P56524 RPL12P26-201ENST00000452430 487 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC022034.3-201ENST00000471393 478 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AP000893.1-201ENST00000474462 794 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 BET1P1-201ENST00000482276 359 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 SETP14-201ENST00000497538 873 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 RPS27AP13-201ENST00000498403 237 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 AC117522.2-201ENST00000510049 657 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC118465.1-201ENST00000513820 1271 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 SNORA70.14-201ENST00000516205 110 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.32□□□□□ -1.72
HDAC4P56524 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.32□□□□□ -1.72
HDAC4P56524 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HDAC4P56524 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.32□□□□□ -1.72
HDAC4P56524 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.32□□□□□ -1.72
HDAC4P56524 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.32□□□□□ -1.72
HDAC4P56524 TRAV15-201ENST00000556680 249 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.32□□□□□ -1.72
HDAC4P56524 AC007599.1-201ENST00000568688 1174 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC023575.1-201ENST00000580510 358 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.32□□□□□ -1.72
HDAC4P56524 VN1R90P-201ENST00000595717 726 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC083899.3-201ENST00000603413 594 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AL031281.1-201ENST00000604049 488 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 ARF4P1-201ENST00000605447 541 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC090246.1-201ENST00000616499 426 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AL713922.2-201ENST00000619384 716 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 MIR8059-201ENST00000620427 81 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC026422.1-201ENST00000623961 452 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 AC004777.1-201ENST00000624317 287 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.32□□□□□ -1.72
HDAC4P56524 AC007671.2-201ENST00000637344 619 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 OR52H1-202ENST00000641796 1061 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 FAM35DP-201ENST00000323387 2712 ntBASIC4.32□□□□□ -1.72
HDAC4P56524 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.32□□□□□ -1.72
HDAC4P56524 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC4P56524 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
HDAC4P56524 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HDAC4P56524 CDR1-202ENST00000625883 1485 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HDAC4P56524 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 ELL2P4-201ENST00000446870 1376 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HDAC4P56524 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HDAC4P56524 Y_RNA.25-201ENST00000362528 102 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms