Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.31□□□□□ -1.88
PKNOX1P55347 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.31□□□□□ -1.88
PKNOX1P55347 RNU6-353P-201ENST00000364266 108 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 RNU6-468P-201ENST00000384003 109 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 RNU6-207P-201ENST00000384137 107 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 SNORA40.4-201ENST00000390971 128 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 RPL21P17-201ENST00000397467 475 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 MIR1250-201ENST00000408098 113 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC073264.1-201ENST00000411508 416 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 OR51A3P-201ENST00000413596 924 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC245291.1-201ENST00000419501 328 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC005517.2-201ENST00000424673 553 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX1P55347 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PKNOX1P55347 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC000041.1-201ENST00000439655 175 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.31□□□□□ -1.88
PKNOX1P55347 RPS26P56-201ENST00000444468 240 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC044797.1-201ENST00000445744 679 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 NPM1P49-201ENST00000448027 714 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC108078.3-201ENST00000502633 489 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.31□□□□□ -1.88
PKNOX1P55347 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PKNOX1P55347 TXNP6-201ENST00000510190 310 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC104115.2-201ENST00000523026 687 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 HIGD1AP5-201ENST00000529959 259 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.31□□□□□ -1.88
PKNOX1P55347 OR5D17P-201ENST00000531492 978 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.31□□□□□ -1.88
PKNOX1P55347 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX1P55347 MIR3160-1-201ENST00000577972 85 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC112230.1-201ENST00000604342 547 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 HSPE1P14-201ENST00000605812 302 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 HMGN2P28-201ENST00000606102 262 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC013468.1-201ENST00000608680 598 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC078880.5-201ENST00000617845 421 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PKNOX1P55347 AC093875.1-201ENST00000623688 504 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 AC068724.3-201ENST00000625906 87 ntBASIC3.31□□□□□ -1.88
PKNOX1P55347 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX1P55347 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX1P55347 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PKNOX1P55347 AL359893.1-201ENST00000447628 1580 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.3□□□□□ -1.88
PKNOX1P55347 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX1P55347 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX1P55347 RN7SKP280-201ENST00000364196 304 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 RNU6-444P-201ENST00000383988 108 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 U6.112-201ENST00000384129 70 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 MIR607-201ENST00000385241 96 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 MTATP6P19-201ENST00000413797 659 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 MTCYBP24-201ENST00000420387 1106 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.3□□□□□ -1.88
PKNOX1P55347 RPP40P1-201ENST00000426762 456 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX1P55347 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX1P55347 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 FTH1P1-201ENST00000437933 532 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC002542.1-201ENST00000440683 193 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.3□□□□□ -1.88
PKNOX1P55347 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX1P55347 NAP1L1P3-201ENST00000462291 880 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX1P55347 AC091959.2-201ENST00000477363 321 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC005726.1-201ENST00000494679 427 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX1P55347 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.3□□□□□ -1.88
PKNOX1P55347 AC112198.1-201ENST00000505369 1220 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 RN7SKP21-201ENST00000516503 220 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.3□□□□□ -1.88
PKNOX1P55347 UBE2NP1-201ENST00000545592 458 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
PKNOX1P55347 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.3□□□□□ -1.88
PKNOX1P55347 AL845331.3-202ENST00000562856 261 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 BPTFP1-201ENST00000579209 492 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 VN1R85P-201ENST00000601587 426 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC011816.2-201ENST00000607089 556 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 PLCE1P1-201ENST00000622094 305 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC073476.4-201ENST00000628409 72 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX1P55347 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX1P55347 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PKNOX1P55347 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AL161912.2-201ENST00000565707 3007 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 AC116096.1-201ENST00000566804 2314 ntBASIC3.3□□□□□ -1.88
PKNOX1P55347 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
PKNOX1P55347 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKNOX1P55347 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms