Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL365396.1-201ENST00000430854 671 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC011742.1-201ENST00000431448 434 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH11P55287 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH11P55287 MTCO1P48-201ENST00000448024 1096 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH11P55287 MTCO3P2-201ENST00000457365 171 ntBASIC3.74□□□□□ -1.81
CDH11P55287 RPL36AP13-201ENST00000457490 317 ntBASIC3.74□□□□□ -1.81
CDH11P55287 RPL31P61-201ENST00000496160 376 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH11P55287 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH11P55287 AC008958.1-201ENST00000511047 682 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC010486.3-201ENST00000511602 785 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH11P55287 OR5AK1P-201ENST00000524837 922 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC087373.1-201ENST00000524920 491 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH11P55287 TRAV8-5-201ENST00000537369 341 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.74□□□□□ -1.81
CDH11P55287 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH11P55287 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 AC090888.1-201ENST00000561335 1141 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AGGF1P8-201ENST00000562979 1000 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL360157.1-201ENST00000565962 87 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH11P55287 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH11P55287 AC067852.4-201ENST00000590314 478 ntBASIC3.74□□□□□ -1.81
CDH11P55287 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.74□□□□□ -1.81
CDH11P55287 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 AC093783.1-201ENST00000612976 329 ntBASIC3.74□□□□□ -1.81
CDH11P55287 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL603755.1-201ENST00000619504 163 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL359715.5-201ENST00000623431 443 ntBASIC3.74□□□□□ -1.81
CDH11P55287 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 BDP1P-201ENST00000582658 1990 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 AL390862.1-201ENST00000635467 1469 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDH11P55287 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 Y_RNA.126-201ENST00000363382 111 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDH11P55287 RPL23AP29-201ENST00000397284 453 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AL590084.2-201ENST00000401481 382 ntBASIC3.73□□□□□ -1.81
CDH11P55287 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH11P55287 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH11P55287 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH11P55287 AL157831.1-201ENST00000426134 473 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AL354941.1-201ENST00000438600 464 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AL356535.1-201ENST00000440335 398 ntBASIC3.73□□□□□ -1.81
CDH11P55287 MTND2P22-201ENST00000444325 1033 ntBASIC3.73□□□□□ -1.81
CDH11P55287 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH11P55287 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH11P55287 AC087385.1-201ENST00000475062 312 ntBASIC3.73□□□□□ -1.81
CDH11P55287 BET1P1-201ENST00000482276 359 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH11P55287 SETP14-201ENST00000497538 873 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC112198.1-201ENST00000505369 1220 ntBASIC3.73□□□□□ -1.81
CDH11P55287 SNX5P1-201ENST00000505757 1041 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 MTND1P22-201ENST00000510572 951 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC026402.1-201ENST00000513642 170 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC104057.1-201ENST00000515547 497 ntBASIC3.73□□□□□ -1.81
CDH11P55287 Y_RNA.688-201ENST00000516565 95 ntBASIC3.73□□□□□ -1.81
CDH11P55287 RNA5SP73-201ENST00000516744 108 ntBASIC3.73□□□□□ -1.81
CDH11P55287 IGKV2D-23-201ENST00000518179 286 ntBASIC3.73□□□□□ -1.81
CDH11P55287 OR4A12P-201ENST00000530847 918 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC107016.1-201ENST00000550463 337 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH11P55287 GNRHR2P1-201ENST00000555315 631 ntBASIC3.73□□□□□ -1.81
CDH11P55287 ISCA1P3-201ENST00000577104 373 ntBASIC3.73□□□□□ -1.81
CDH11P55287 MIR4644-201ENST00000579929 84 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.73□□□□□ -1.81
CDH11P55287 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 AC018714.1-201ENST00000605028 208 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 AC245297.2-201ENST00000610119 565 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 AC092650.2-201ENST00000619984 902 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AL445363.3-201ENST00000623080 671 ntBASIC3.73□□□□□ -1.81
CDH11P55287 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.73□□□□□ -1.81
CDH11P55287 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 MTND5P24-201ENST00000438892 1767 ntBASIC3.73□□□□□ -1.81
CDH11P55287 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 ELL2P4-201ENST00000446870 1376 ntBASIC3.73□□□□□ -1.81
CDH11P55287 LARP1BP1-201ENST00000506036 1359 ntBASIC3.73□□□□□ -1.81
CDH11P55287 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH11P55287 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CDH11P55287 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms