Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.55□□□□□ -2
POLR2JP52435 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
POLR2JP52435 SNORA31.26-201ENST00000517250 137 ntBASIC2.55□□□□□ -2
POLR2JP52435 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.55□□□□□ -2
POLR2JP52435 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.55□□□□□ -2
POLR2JP52435 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.55□□□□□ -2
POLR2JP52435 AL157394.1-201ENST00000562983 1224 ntBASIC2.55□□□□□ -2
POLR2JP52435 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.55□□□□□ -2
POLR2JP52435 AC017002.4-201ENST00000604721 1525 ntBASIC2.55□□□□□ -2
POLR2JP52435 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
POLR2JP52435 ATP5A1P2-202ENST00000616464 443 ntBASIC2.55□□□□□ -2
POLR2JP52435 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.55□□□□□ -2
POLR2JP52435 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
POLR2JP52435 ZNF807-201ENST00000328088 1707 ntBASIC2.54□□□□□ -2
POLR2JP52435 MIR34B-201ENST00000385076 84 ntBASIC2.54□□□□□ -2
POLR2JP52435 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
POLR2JP52435 YPEL5P1-201ENST00000419731 367 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.54□□□□□ -2
POLR2JP52435 RPL35AP12-201ENST00000425362 338 ntBASIC2.54□□□□□ -2
POLR2JP52435 SETP8-201ENST00000435341 628 ntBASIC2.54□□□□□ -2
POLR2JP52435 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.54□□□□□ -2
POLR2JP52435 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.54□□□□□ -2
POLR2JP52435 AC010374.2-201ENST00000512933 535 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC108471.1-201ENST00000513977 287 ntBASIC2.54□□□□□ -2
POLR2JP52435 RN7SKP282-201ENST00000516824 299 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.54□□□□□ -2
POLR2JP52435 AC100870.1-201ENST00000522035 505 ntBASIC2.54□□□□□ -2
POLR2JP52435 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC123904.3-201ENST00000547218 814 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC007954.1-201ENST00000554198 494 ntBASIC2.54□□□□□ -2
POLR2JP52435 MTCO3P24-201ENST00000572729 782 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC012493.2-201ENST00000595083 291 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.54□□□□□ -2
POLR2JP52435 AC125494.3-201ENST00000602759 455 ntBASIC2.54□□□□□ -2
POLR2JP52435 AC015849.6-201ENST00000605454 474 ntBASIC2.54□□□□□ -2
POLR2JP52435 SAGE4P-201ENST00000442271 3381 ntBASIC2.54□□□□□ -2
POLR2JP52435 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
POLR2JP52435 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.54□□□□□ -2
POLR2JP52435 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
POLR2JP52435 MTND5P1-201ENST00000445440 1375 ntBASIC2.53□□□□□ -2
POLR2JP52435 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.53□□□□□ -2
POLR2JP52435 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
POLR2JP52435 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.53□□□□□ -2
POLR2JP52435 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
POLR2JP52435 RNU1-100P-201ENST00000365255 165 ntBASIC2.53□□□□□ -2
POLR2JP52435 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.53□□□□□ -2
POLR2JP52435 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
POLR2JP52435 RNU6-225P-201ENST00000384613 103 ntBASIC2.53□□□□□ -2
POLR2JP52435 RPL31P52-201ENST00000407532 367 ntBASIC2.53□□□□□ -2
POLR2JP52435 SNORA81-201ENST00000408493 178 ntBASIC2.53□□□□□ -2
POLR2JP52435 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.53□□□□□ -2
POLR2JP52435 AL139132.1-201ENST00000431587 344 ntBASIC2.53□□□□□ -2
POLR2JP52435 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.53□□□□□ -2
POLR2JP52435 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.53□□□□□ -2
POLR2JP52435 CACYBPP2-201ENST00000453625 678 ntBASIC2.53□□□□□ -2
POLR2JP52435 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.53□□□□□ -2
POLR2JP52435 ARPC3P2-201ENST00000457786 533 ntBASIC2.53□□□□□ -2
POLR2JP52435 AC005912.1-201ENST00000495392 255 ntBASIC2.53□□□□□ -2
POLR2JP52435 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.53□□□□□ -2
POLR2JP52435 AC090136.1-201ENST00000520009 240 ntBASIC2.53□□□□□ -2
POLR2JP52435 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.53□□□□□ -2
POLR2JP52435 AP004242.1-201ENST00000533701 349 ntBASIC2.53□□□□□ -2
POLR2JP52435 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.53□□□□□ -2
POLR2JP52435 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.53□□□□□ -2
POLR2JP52435 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.53□□□□□ -2
POLR2JP52435 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.53□□□□□ -2
POLR2JP52435 MIR4444-1-201ENST00000581696 74 ntBASIC2.53□□□□□ -2
POLR2JP52435 MIR4444-2-201ENST00000584390 74 ntBASIC2.53□□□□□ -2
POLR2JP52435 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.53□□□□□ -2
POLR2JP52435 AL160237.3-201ENST00000604114 1013 ntBASIC2.53□□□□□ -2
POLR2JP52435 AC034236.3-201ENST00000605999 461 ntBASIC2.53□□□□□ -2
POLR2JP52435 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
POLR2JP52435 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.53□□□□□ -2
POLR2JP52435 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
POLR2JP52435 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
POLR2JP52435 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
POLR2JP52435 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
POLR2JP52435 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR2JP52435 SNORA18.3-201ENST00000384122 132 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
POLR2JP52435 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
POLR2JP52435 AC093084.1-201ENST00000424233 687 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 RPL30P3-201ENST00000424262 333 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.52□□□□□ -2.01
POLR2JP52435 RPL21P2-201ENST00000440049 481 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.52□□□□□ -2.01
POLR2JP52435 AL671855.1-201ENST00000446875 1203 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 VN1R48P-201ENST00000448149 1036 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC069277.2-201ENST00000454211 432 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR2JP52435 AP001992.1-205ENST00000462248 379 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC126182.1-201ENST00000478134 357 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
POLR2JP52435 RNA5SP341-201ENST00000516261 117 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC010306.1-201ENST00000523223 1117 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.52□□□□□ -2.01
POLR2JP52435 AL121594.4-201ENST00000556211 1196 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC078899.3-201ENST00000599065 212 ntBASIC2.52□□□□□ -2.01
POLR2JP52435 AC079880.2-201ENST00000603790 1213 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms