Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL136133.1-201ENST00000413694 376 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AL161449.1-201ENST00000414531 1199 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AL008987.1-201ENST00000415528 237 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC009518.2-201ENST00000418056 731 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 MTCO3P1-205ENST00000422088 832 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCN3P51790 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCN3P51790 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCN3P51790 AL133477.1-201ENST00000457472 514 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 AC010468.1-201ENST00000461022 817 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CLCN3P51790 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCN3P51790 RPL7P24-201ENST00000493052 752 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC005726.1-201ENST00000494679 427 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC091951.3-201ENST00000504093 246 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCN3P51790 AC113430.1-201ENST00000506872 718 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC109445.1-201ENST00000512356 383 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCN3P51790 RNU6-1129P-201ENST00000515964 104 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.24□□□□□ -1.73
CLCN3P51790 AC010198.2-201ENST00000550612 259 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 SULT1C2P1-202ENST00000562418 459 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 OR4K7P-201ENST00000580232 945 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCN3P51790 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.24□□□□□ -1.73
CLCN3P51790 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCN3P51790 AC078883.4-201ENST00000623218 367 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 AC098679.5-201ENST00000624394 571 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCN3P51790 MIR4278-201ENST00000636094 69 ntBASIC4.24□□□□□ -1.73
CLCN3P51790 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCN3P51790 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN3P51790 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN3P51790 AC107982.1-201ENST00000507171 1300 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN3P51790 AC117529.2-201ENST00000512159 2068 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN3P51790 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 RNA5SP52-201ENST00000362448 134 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 SNORA5A-201ENST00000384111 134 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 RPL23AP47-201ENST00000408017 460 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 RPL31P2-201ENST00000413849 377 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 MTND2P18-201ENST00000419962 1030 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC092647.1-201ENST00000420654 287 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC069157.1-201ENST00000421749 137 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC008065.1-201ENST00000428525 348 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLCN3P51790 AL358232.1-201ENST00000448030 501 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.23□□□□□ -1.73
CLCN3P51790 AL133162.1-201ENST00000463228 453 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 RPL5P30-201ENST00000465511 891 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC091153.1-201ENST00000466297 402 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 UBE2CP3-201ENST00000502715 450 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN3P51790 RNU1-95P-201ENST00000516357 160 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 RNU1-128P-201ENST00000516704 160 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 MTND2P26-201ENST00000528255 1029 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 AL356057.1-201ENST00000533798 831 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.23□□□□□ -1.73
CLCN3P51790 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN3P51790 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 AC115621.1-201ENST00000604653 858 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC091946.2-201ENST00000606105 291 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AL391497.1-201ENST00000608671 547 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 TUSC7.1-201ENST00000610969 165 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AC068722.2-201ENST00000618734 544 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 AC004943.3-201ENST00000624116 600 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 MIR1322-201ENST00000638013 71 ntBASIC4.23□□□□□ -1.73
CLCN3P51790 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CLCN3P51790 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.23□□□□□ -1.73
CLCN3P51790 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN3P51790 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
CLCN3P51790 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN3P51790 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCN3P51790 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCN3P51790 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCN3P51790 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCN3P51790 RNU6-1243P-201ENST00000364028 107 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLCN3P51790 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLCN3P51790 AC007066.1-201ENST00000392902 381 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 RPL21P17-201ENST00000397467 475 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms