Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPL21P32-201ENST00000419877 477 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AL365184.2-201ENST00000431139 435 ntBASIC5.34□□□□□ -1.55
MRE11P49959 ELOCP18-201ENST00000434209 337 ntBASIC5.34□□□□□ -1.55
MRE11P49959 UBE2FP3-201ENST00000436366 524 ntBASIC5.34□□□□□ -1.55
MRE11P49959 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.34□□□□□ -1.55
MRE11P49959 WASF1P1-201ENST00000447560 1131 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.34□□□□□ -1.55
MRE11P49959 PRDX4P1-201ENST00000507189 574 ntBASIC5.34□□□□□ -1.55
MRE11P49959 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.34□□□□□ -1.55
MRE11P49959 AC048346.1-201ENST00000510247 144 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC109471.1-201ENST00000511631 612 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 RNY4P37-201ENST00000516225 96 ntBASIC5.34□□□□□ -1.55
MRE11P49959 SNORA67.7-201ENST00000516664 135 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MRE11P49959 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 AC023575.1-201ENST00000580510 358 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC012417.1-201ENST00000582307 1039 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 MIR4691-201ENST00000583764 85 ntBASIC5.34□□□□□ -1.55
MRE11P49959 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.34□□□□□ -1.55
MRE11P49959 AP004247.3-201ENST00000608682 624 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC012409.3-201ENST00000611343 981 ntBASIC5.34□□□□□ -1.55
MRE11P49959 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.34□□□□□ -1.55
MRE11P49959 AL356596.1-201ENST00000624230 379 ntBASIC5.34□□□□□ -1.55
MRE11P49959 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.34□□□□□ -1.55
MRE11P49959 OR5H6-203ENST00000642105 978 ntBASIC5.34□□□□□ -1.55
MRE11P49959 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
MRE11P49959 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.34□□□□□ -1.55
MRE11P49959 MTND5P26-201ENST00000426018 1752 ntBASIC5.34□□□□□ -1.56
MRE11P49959 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
MRE11P49959 MAPK10-263ENST00000641052 4307 ntBASIC5.34□□□□□ -1.56
MRE11P49959 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.33□□□□□ -1.56
MRE11P49959 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MRE11P49959 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MRE11P49959 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.33□□□□□ -1.56
MRE11P49959 Y_RNA.303-201ENST00000364998 94 ntBASIC5.33□□□□□ -1.56
MRE11P49959 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.33□□□□□ -1.56
MRE11P49959 TBCAP2-201ENST00000416175 326 ntBASIC5.33□□□□□ -1.56
MRE11P49959 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 Z97055.1-201ENST00000419730 712 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC092647.1-201ENST00000420654 287 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AL592293.2-201ENST00000422292 996 ntBASIC5.33□□□□□ -1.56
MRE11P49959 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.33□□□□□ -1.56
MRE11P49959 OR8F1P-201ENST00000425243 930 ntBASIC5.33□□□□□ -1.56
MRE11P49959 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 AC073335.1-201ENST00000427776 363 ntBASIC5.33□□□□□ -1.56
MRE11P49959 MTCO3P21-201ENST00000430791 643 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 AC112498.1-201ENST00000444401 332 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 VN1R10P-201ENST00000447106 875 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.33□□□□□ -1.56
MRE11P49959 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.33□□□□□ -1.56
MRE11P49959 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MRE11P49959 AC140172.1-201ENST00000502928 141 ntBASIC5.33□□□□□ -1.56
MRE11P49959 SNX5P1-201ENST00000505757 1041 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.33□□□□□ -1.56
MRE11P49959 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 RPL7L1P13-201ENST00000511702 739 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.33□□□□□ -1.56
MRE11P49959 MTCO1P35-201ENST00000515270 228 ntBASIC5.33□□□□□ -1.56
MRE11P49959 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.33□□□□□ -1.56
MRE11P49959 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.33□□□□□ -1.56
MRE11P49959 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC090281.1-201ENST00000523019 276 ntBASIC5.33□□□□□ -1.56
MRE11P49959 OR5M7P-201ENST00000526140 972 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AP001189.2-201ENST00000527320 189 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC118273.2-201ENST00000532092 465 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.33□□□□□ -1.56
MRE11P49959 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MRE11P49959 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.33□□□□□ -1.56
MRE11P49959 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.33□□□□□ -1.56
MRE11P49959 AL356218.2-201ENST00000605264 187 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC004067.1-201ENST00000608733 700 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC090970.3-201ENST00000612566 866 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AL022401.1-201ENST00000619498 108 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AL356321.1-201ENST00000621360 228 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC022140.2-201ENST00000623500 188 ntBASIC5.33□□□□□ -1.56
MRE11P49959 AC011944.2-201ENST00000624440 683 ntBASIC5.33□□□□□ -1.56
MRE11P49959 OR5AK4P-201ENST00000635912 903 ntBASIC5.33□□□□□ -1.56
MRE11P49959 MKKS-204ENST00000639674 192 ntBASIC5.33□□□□□ -1.56
MRE11P49959 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
MRE11P49959 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
MRE11P49959 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
MRE11P49959 ASNSP1-201ENST00000518311 1939 ntBASIC5.33□□□□□ -1.56
MRE11P49959 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 AC107982.1-201ENST00000507171 1300 ntBASIC5.32□□□□□ -1.56
MRE11P49959 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 AC097504.1-201ENST00000515103 2415 ntBASIC5.32□□□□□ -1.56
MRE11P49959 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms