Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.66□□□□□ -1.82
SSR1P43307 SETP2-201ENST00000553886 926 ntBASIC3.66□□□□□ -1.82
SSR1P43307 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
SSR1P43307 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 AL590282.1-201ENST00000610379 1136 ntBASIC3.66□□□□□ -1.82
SSR1P43307 AL359535.1-201ENST00000612100 1087 ntBASIC3.66□□□□□ -1.82
SSR1P43307 AL163051.2-201ENST00000618976 735 ntBASIC3.66□□□□□ -1.82
SSR1P43307 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 AC083865.1-201ENST00000636634 831 ntBASIC3.66□□□□□ -1.82
SSR1P43307 AC090897.3-201ENST00000636973 1157 ntBASIC3.66□□□□□ -1.82
SSR1P43307 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSR1P43307 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SSR1P43307 RPL21P17-201ENST00000397467 475 ntBASIC3.65□□□□□ -1.83
SSR1P43307 ATP5A1P2-201ENST00000412323 255 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AC126124.2-201ENST00000413542 321 ntBASIC3.65□□□□□ -1.83
SSR1P43307 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.65□□□□□ -1.83
SSR1P43307 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SSR1P43307 USP9YP36-201ENST00000424581 829 ntBASIC3.65□□□□□ -1.83
SSR1P43307 ELOCP13-201ENST00000443934 329 ntBASIC3.65□□□□□ -1.83
SSR1P43307 GAPDHP27-201ENST00000447427 1020 ntBASIC3.65□□□□□ -1.83
SSR1P43307 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSR1P43307 AC020893.1-201ENST00000502452 580 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.65□□□□□ -1.83
SSR1P43307 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSR1P43307 AC104619.4-201ENST00000510773 249 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AC092593.2-201ENST00000513866 913 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 RNU6-1102P-201ENST00000516149 96 ntBASIC3.65□□□□□ -1.83
SSR1P43307 RNA5SP468-201ENST00000516782 93 ntBASIC3.65□□□□□ -1.83
SSR1P43307 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AP006245.1-201ENST00000522549 120 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 AL731537.2-201ENST00000561565 951 ntBASIC3.65□□□□□ -1.83
SSR1P43307 EIF5A2P1-201ENST00000564027 460 ntBASIC3.65□□□□□ -1.83
SSR1P43307 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.65□□□□□ -1.83
SSR1P43307 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.65□□□□□ -1.83
SSR1P43307 AC100814.1-201ENST00000606963 623 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AL354696.1-201ENST00000614652 497 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AP000676.4-201ENST00000624659 623 ntBASIC3.65□□□□□ -1.83
SSR1P43307 HPVC1-201ENST00000629899 1198 ntBASIC3.65□□□□□ -1.83
SSR1P43307 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.83
SSR1P43307 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.65□□□□□ -1.83
SSR1P43307 MTND4P21-201ENST00000453886 1357 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.64□□□□□ -1.83
SSR1P43307 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSR1P43307 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSR1P43307 ENSAP3-201ENST00000312710 333 ntBASIC3.64□□□□□ -1.83
SSR1P43307 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSR1P43307 MIR30E-201ENST00000362104 92 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RNA5SP27-201ENST00000363839 119 ntBASIC3.64□□□□□ -1.83
SSR1P43307 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSR1P43307 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SSR1P43307 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSR1P43307 RPL21P75-201ENST00000396599 483 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RPL21P28-201ENST00000401418 483 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AL592114.1-201ENST00000403842 483 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RN7SKP159-201ENST00000410657 292 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RNU6-55P-201ENST00000411092 107 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RNU6-954P-201ENST00000411355 107 ntBASIC3.64□□□□□ -1.83
SSR1P43307 OSTCP5-201ENST00000425293 453 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AL035246.1-201ENST00000433554 1255 ntBASIC3.64□□□□□ -1.83
SSR1P43307 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSR1P43307 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.64□□□□□ -1.83
SSR1P43307 AC146507.2-201ENST00000460608 476 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RPL21P39-201ENST00000463605 483 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AC011979.1-201ENST00000472300 483 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RPL21P93-201ENST00000480465 489 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AC233702.1-201ENST00000482905 502 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AC087190.1-201ENST00000484462 480 ntBASIC3.64□□□□□ -1.83
SSR1P43307 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.64□□□□□ -1.83
SSR1P43307 AC093591.1-201ENST00000491435 481 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RPL21P129-201ENST00000491732 478 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RPL21P16-201ENST00000495531 483 ntBASIC3.64□□□□□ -1.83
SSR1P43307 SETP14-201ENST00000497538 873 ntBASIC3.64□□□□□ -1.83
SSR1P43307 HSPD1P15-201ENST00000505573 1122 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.64□□□□□ -1.83
SSR1P43307 AC110768.1-201ENST00000509222 400 ntBASIC3.64□□□□□ -1.83
SSR1P43307 RNU6-202P-201ENST00000515998 96 ntBASIC3.64□□□□□ -1.83
SSR1P43307 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.64□□□□□ -1.83
SSR1P43307 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms