Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC010198.2-201ENST00000550612 259 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AL161713.1-201ENST00000555538 145 ntBASIC3.5□□□□□ -1.85
SHC1P29353 DUXAP1-201ENST00000556632 463 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.5□□□□□ -1.85
SHC1P29353 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.5□□□□□ -1.85
SHC1P29353 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.5□□□□□ -1.85
SHC1P29353 MIR4458-201ENST00000578872 75 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 AC115085.1-201ENST00000588924 229 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.5□□□□□ -1.85
SHC1P29353 OR2AS2P-201ENST00000606902 342 ntBASIC3.5□□□□□ -1.85
SHC1P29353 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.5□□□□□ -1.85
SHC1P29353 AP005137.2-201ENST00000609238 400 ntBASIC3.5□□□□□ -1.85
SHC1P29353 VIS1.1-201ENST00000610517 203 ntBASIC3.5□□□□□ -1.85
SHC1P29353 AL139418.1-201ENST00000613613 177 ntBASIC3.5□□□□□ -1.85
SHC1P29353 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 CDRT1-208ENST00000630868 794 ntBASIC3.5□□□□□ -1.85
SHC1P29353 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHC1P29353 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 TNPO1P3-201ENST00000436471 2662 ntBASIC3.5□□□□□ -1.85
SHC1P29353 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.5□□□□□ -1.85
SHC1P29353 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHC1P29353 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 MTND4P31-201ENST00000425607 1343 ntBASIC3.49□□□□□ -1.85
SHC1P29353 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 AC090229.1-201ENST00000590983 1609 ntBASIC3.49□□□□□ -1.85
SHC1P29353 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 AP005901.5-201ENST00000545779 1796 ntBASIC3.49□□□□□ -1.85
SHC1P29353 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SHC1P29353 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SHC1P29353 OR1L1-202ENST00000373686 1083 ntBASIC3.49□□□□□ -1.85
SHC1P29353 HNRNPDP2-201ENST00000406475 478 ntBASIC3.49□□□□□ -1.85
SHC1P29353 HSPE1P8-201ENST00000406997 288 ntBASIC3.49□□□□□ -1.85
SHC1P29353 RNU6-77P-201ENST00000410554 91 ntBASIC3.49□□□□□ -1.85
SHC1P29353 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 SEPT2P1-201ENST00000419651 180 ntBASIC3.49□□□□□ -1.85
SHC1P29353 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.49□□□□□ -1.85
SHC1P29353 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 RPL23AP76-201ENST00000441860 458 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 AL445669.2-201ENST00000454425 421 ntBASIC3.49□□□□□ -1.85
SHC1P29353 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 MTND3P7-201ENST00000474435 343 ntBASIC3.49□□□□□ -1.85
SHC1P29353 RAP1BP2-201ENST00000478270 544 ntBASIC3.49□□□□□ -1.85
SHC1P29353 OR2A20P-203ENST00000498397 1268 ntBASIC3.49□□□□□ -1.85
SHC1P29353 RPF2P2-201ENST00000504693 896 ntBASIC3.49□□□□□ -1.85
SHC1P29353 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.49□□□□□ -1.85
SHC1P29353 AC111000.2-201ENST00000507775 550 ntBASIC3.49□□□□□ -1.85
SHC1P29353 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 RNU6-759P-201ENST00000516740 103 ntBASIC3.49□□□□□ -1.85
SHC1P29353 SCARNA14-201ENST00000516903 136 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 OR4A12P-201ENST00000530847 918 ntBASIC3.49□□□□□ -1.85
SHC1P29353 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AC135001.1-201ENST00000544546 283 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.49□□□□□ -1.85
SHC1P29353 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 AC087465.1-201ENST00000560574 245 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC106785.1-201ENST00000565935 262 ntBASIC3.49□□□□□ -1.85
SHC1P29353 MIR3912-201ENST00000577566 105 ntBASIC3.49□□□□□ -1.85
SHC1P29353 MIR4644-201ENST00000579929 84 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC005255.1-201ENST00000593748 216 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.49□□□□□ -1.85
SHC1P29353 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 AC025165.5-201ENST00000602802 578 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC124312.4-201ENST00000605533 310 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.49□□□□□ -1.85
SHC1P29353 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 AC087821.2-201ENST00000637086 450 ntBASIC3.49□□□□□ -1.85
SHC1P29353 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.49□□□□□ -1.85
SHC1P29353 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 AL049737.1-201ENST00000413920 1403 ntBASIC3.49□□□□□ -1.85
SHC1P29353 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SHC1P29353 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 AP000526.1-201ENST00000603308 1388 ntBASIC3.49□□□□□ -1.85
SHC1P29353 NSRP1P1-201ENST00000444067 1693 ntBASIC3.49□□□□□ -1.85
SHC1P29353 CR381670.1-201ENST00000624291 1693 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms