Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.98□□□□□ -1.61
SMARCA1P28370 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.98□□□□□ -1.61
SMARCA1P28370 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.98□□□□□ -1.61
SMARCA1P28370 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.98□□□□□ -1.61
SMARCA1P28370 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.98□□□□□ -1.61
SMARCA1P28370 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMARCA1P28370 AC107214.2-201ENST00000608204 634 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 AL138721.1-201ENST00000616756 179 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 AC000123.2-201ENST00000623124 461 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.98□□□□□ -1.61
SMARCA1P28370 AP006248.2-201ENST00000623309 592 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 AP000843.1-201ENST00000624880 701 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
SMARCA1P28370 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.98□□□□□ -1.61
SMARCA1P28370 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMARCA1P28370 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMARCA1P28370 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMARCA1P28370 AC117529.2-201ENST00000512159 2068 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SMARCA1P28370 AL139811.1-201ENST00000424779 2299 ntBASIC4.98□□□□□ -1.61
SMARCA1P28370 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SMARCA1P28370 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
SMARCA1P28370 CR383658.2-201ENST00000547576 1525 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SMARCA1P28370 PNPT1P2-201ENST00000456768 2050 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMARCA1P28370 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMARCA1P28370 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SMARCA1P28370 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.97□□□□□ -1.61
SMARCA1P28370 RNU6-723P-201ENST00000383973 107 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 RNU6-192P-201ENST00000391253 100 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 OR6C69P-201ENST00000394268 893 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 DEFB108C-201ENST00000400154 252 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 PGBD4P8-201ENST00000412993 562 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMARCA1P28370 MTCO1P21-201ENST00000416634 589 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.97□□□□□ -1.61
SMARCA1P28370 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.97□□□□□ -1.61
SMARCA1P28370 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 RPS3AP54-201ENST00000435535 734 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMARCA1P28370 USP9YP29-201ENST00000445112 563 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 COX6CP12-201ENST00000446748 202 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 SNRPGP9-201ENST00000456025 225 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 RPL7P22-201ENST00000466005 733 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC092757.1-201ENST00000467293 467 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SMARCA1P28370 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC104164.2-201ENST00000496953 495 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AC010625.1-201ENST00000511296 403 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.97□□□□□ -1.61
SMARCA1P28370 MTCYBP20-201ENST00000524239 1129 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AP003730.1-201ENST00000524605 285 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC100770.1-201ENST00000532310 322 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AC124068.1-201ENST00000563131 678 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AC078795.2-201ENST00000602835 1252 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AL139286.2-201ENST00000606838 396 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC004492.1-201ENST00000607036 742 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC025594.3-201ENST00000613068 790 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC243773.3-201ENST00000613270 256 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AL445567.2-201ENST00000618935 498 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AC068792.1-201ENST00000621354 417 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMARCA1P28370 MIR6715B-201ENST00000637172 77 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 AL392088.2-201ENST00000637607 285 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 OR52H1-202ENST00000641796 1061 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SMARCA1P28370 AC026951.1-201ENST00000559530 2459 ntBASIC4.97□□□□□ -1.61
SMARCA1P28370 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SMARCA1P28370 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.97□□□□□ -1.61
SMARCA1P28370 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.61
SMARCA1P28370 MTND5P28-201ENST00000438005 1594 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.96□□□□□ -1.62
SMARCA1P28370 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.96□□□□□ -1.62
SMARCA1P28370 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SMARCA1P28370 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMARCA1P28370 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
SMARCA1P28370 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SMARCA1P28370 RNU1-85P-201ENST00000364127 164 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 AC068538.1-201ENST00000376856 336 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 RPL23AP26-201ENST00000412728 464 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.96□□□□□ -1.62
SMARCA1P28370 AC092647.1-201ENST00000420654 287 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 ZYG11AP1-201ENST00000430329 837 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.96□□□□□ -1.62
SMARCA1P28370 UBE2FP3-201ENST00000436366 524 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 VN1R10P-201ENST00000447106 875 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.96□□□□□ -1.62
SMARCA1P28370 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.96□□□□□ -1.62
SMARCA1P28370 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMARCA1P28370 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.96□□□□□ -1.62
SMARCA1P28370 RN7SL385P-201ENST00000468873 276 ntBASIC4.96□□□□□ -1.62
SMARCA1P28370 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms