Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 RNU6-516P-201ENST00000411381 104 ntBASIC4.62□□□□□ -1.67
CD40P25942 OR9R1P-201ENST00000412200 877 ntBASIC4.62□□□□□ -1.67
CD40P25942 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.62□□□□□ -1.67
CD40P25942 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 AC098614.3-201ENST00000438957 440 ntBASIC4.62□□□□□ -1.67
CD40P25942 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 CALM1P1-201ENST00000442082 433 ntBASIC4.62□□□□□ -1.67
CD40P25942 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 AL389915.2-201ENST00000454576 441 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 AC068305.1-201ENST00000497406 726 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC091951.2-201ENST00000500762 203 ntBASIC4.62□□□□□ -1.67
CD40P25942 SNRPCP2-201ENST00000504370 475 ntBASIC4.62□□□□□ -1.67
CD40P25942 RPS4XP20-201ENST00000505751 772 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC114786.4-201ENST00000508771 728 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC091912.1-201ENST00000511351 248 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 HMGN2P6-201ENST00000551091 273 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.62□□□□□ -1.67
CD40P25942 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 AP001429.1-201ENST00000602568 530 ntBASIC4.62□□□□□ -1.67
CD40P25942 RMST_3.1-201ENST00000611651 109 ntBASIC4.62□□□□□ -1.67
CD40P25942 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 AC024940.5-201ENST00000622889 474 ntBASIC4.62□□□□□ -1.67
CD40P25942 AP003122.6-201ENST00000623831 495 ntBASIC4.62□□□□□ -1.67
CD40P25942 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 AC024614.3-201ENST00000637860 256 ntBASIC4.62□□□□□ -1.67
CD40P25942 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CD40P25942 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 AC000374.1-201ENST00000434698 1745 ntBASIC4.62□□□□□ -1.67
CD40P25942 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 AL049555.1-201ENST00000562834 1933 ntBASIC4.62□□□□□ -1.67
CD40P25942 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CD40P25942 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 AC138907.8-201ENST00000623981 2256 ntBASIC4.61□□□□□ -1.67
CD40P25942 Z95331.1-201ENST00000623075 23112 ntBASIC4.61□□□□□ -1.67
CD40P25942 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CD40P25942 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 CBX3P1-201ENST00000325243 554 ntBASIC4.61□□□□□ -1.67
CD40P25942 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 U8.4-201ENST00000363626 134 ntBASIC4.61□□□□□ -1.67
CD40P25942 RNU6-432P-201ENST00000384196 109 ntBASIC4.61□□□□□ -1.67
CD40P25942 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CD40P25942 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 SNORA11B-201ENST00000408175 129 ntBASIC4.61□□□□□ -1.67
CD40P25942 RN7SKP213-201ENST00000410746 298 ntBASIC4.61□□□□□ -1.67
CD40P25942 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 RPL23AP27-201ENST00000415161 451 ntBASIC4.61□□□□□ -1.67
CD40P25942 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.61□□□□□ -1.67
CD40P25942 MRPS18BP2-201ENST00000434310 759 ntBASIC4.61□□□□□ -1.67
CD40P25942 RPS20P5-201ENST00000434808 360 ntBASIC4.61□□□□□ -1.67
CD40P25942 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 PTMAP6-201ENST00000439110 327 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 AC006480.1-201ENST00000449887 378 ntBASIC4.61□□□□□ -1.67
CD40P25942 SNRPGP6-201ENST00000451124 220 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC104634.1-201ENST00000452720 462 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC007967.1-201ENST00000455422 1159 ntBASIC4.61□□□□□ -1.67
CD40P25942 Z92846.1-201ENST00000456203 268 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC233702.1-201ENST00000482905 502 ntBASIC4.61□□□□□ -1.67
CD40P25942 RPS3AP50-201ENST00000487064 803 ntBASIC4.61□□□□□ -1.67
CD40P25942 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 HSPD1P15-201ENST00000505573 1122 ntBASIC4.61□□□□□ -1.67
CD40P25942 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 RNA5SP401-201ENST00000515920 127 ntBASIC4.61□□□□□ -1.67
CD40P25942 RNU6-875P-201ENST00000516488 106 ntBASIC4.61□□□□□ -1.67
CD40P25942 RNA5SP373-201ENST00000517271 95 ntBASIC4.61□□□□□ -1.67
CD40P25942 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.61□□□□□ -1.67
CD40P25942 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms