Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 AC063976.2-201ENST00000425667 3556 ntBASIC5.96□□□□□ -1.46
LIG1P18858 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 AC104623.2-202ENST00000623477 4002 ntBASIC5.96□□□□□ -1.46
LIG1P18858 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIG1P18858 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
LIG1P18858 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LIG1P18858 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIG1P18858 RPL23AP32-201ENST00000395315 459 ntBASIC5.95□□□□□ -1.46
LIG1P18858 HSPA8P15-201ENST00000401676 786 ntBASIC5.95□□□□□ -1.46
LIG1P18858 RPL7P25-201ENST00000404151 721 ntBASIC5.95□□□□□ -1.46
LIG1P18858 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.95□□□□□ -1.46
LIG1P18858 MTATP6P18-201ENST00000417994 673 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.95□□□□□ -1.46
LIG1P18858 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.95□□□□□ -1.46
LIG1P18858 RPL12P34-201ENST00000424532 479 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.95□□□□□ -1.46
LIG1P18858 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.95□□□□□ -1.46
LIG1P18858 GAPDHP25-201ENST00000447061 1001 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AL136380.1-201ENST00000447970 162 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC233279.1-201ENST00000455300 423 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC063943.1-201ENST00000465434 453 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC090142.1-201ENST00000465776 462 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.95□□□□□ -1.46
LIG1P18858 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.95□□□□□ -1.46
LIG1P18858 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.95□□□□□ -1.46
LIG1P18858 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.95□□□□□ -1.46
LIG1P18858 Vault.3-201ENST00000516676 95 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC022690.1-201ENST00000526681 550 ntBASIC5.95□□□□□ -1.46
LIG1P18858 OR5M2P-201ENST00000529003 936 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC090022.1-201ENST00000546569 311 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC126177.5-201ENST00000549599 178 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.95□□□□□ -1.46
LIG1P18858 PSMA3P-201ENST00000555485 635 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.95□□□□□ -1.46
LIG1P18858 HSPE1P3-201ENST00000559254 309 ntBASIC5.95□□□□□ -1.46
LIG1P18858 LINC00622-201ENST00000562811 1570 ntBASIC5.95□□□□□ -1.46
LIG1P18858 RPL10P14-201ENST00000565265 298 ntBASIC5.95□□□□□ -1.46
LIG1P18858 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.95□□□□□ -1.46
LIG1P18858 AL355375.2-201ENST00000574825 175 ntBASIC5.95□□□□□ -1.46
LIG1P18858 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.95□□□□□ -1.46
LIG1P18858 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.95□□□□□ -1.46
LIG1P18858 AC009597.2-201ENST00000604659 592 ntBASIC5.95□□□□□ -1.46
LIG1P18858 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.95□□□□□ -1.46
LIG1P18858 uc_338.9-201ENST00000617424 182 ntBASIC5.95□□□□□ -1.46
LIG1P18858 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.95□□□□□ -1.46
LIG1P18858 AC024940.5-201ENST00000622889 474 ntBASIC5.95□□□□□ -1.46
LIG1P18858 CYP4F35P-202ENST00000636121 390 ntBASIC5.95□□□□□ -1.46
LIG1P18858 MUC2-202ENST00000613187 4845 ntBASIC5.95□□□□□ -1.46
LIG1P18858 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.95□□□□□ -1.46
LIG1P18858 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.95□□□□□ -1.46
LIG1P18858 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIG1P18858 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.95□□□□□ -1.46
LIG1P18858 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIG1P18858 SMG1P4-204ENST00000523028 4131 ntBASIC5.94□□□□□ -1.46
LIG1P18858 C4BPAP1-201ENST00000415474 1893 ntBASIC5.94□□□□□ -1.46
LIG1P18858 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
LIG1P18858 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIG1P18858 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.94□□□□□ -1.46
LIG1P18858 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LIG1P18858 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LIG1P18858 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LIG1P18858 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
LIG1P18858 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIG1P18858 MIR105-1-201ENST00000385222 81 ntBASIC5.94□□□□□ -1.46
LIG1P18858 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
LIG1P18858 MIR1286-201ENST00000408112 78 ntBASIC5.94□□□□□ -1.46
LIG1P18858 RN7SKP32-201ENST00000410167 303 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC127391.1-201ENST00000411737 98 ntBASIC5.94□□□□□ -1.46
LIG1P18858 MRPL50P2-201ENST00000416821 482 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.94□□□□□ -1.46
LIG1P18858 AC007394.1-201ENST00000421941 531 ntBASIC5.94□□□□□ -1.46
LIG1P18858 BX510359.3-201ENST00000422168 306 ntBASIC5.94□□□□□ -1.46
LIG1P18858 MTCO2P5-201ENST00000422621 426 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AL353729.1-201ENST00000425044 720 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIG1P18858 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.94□□□□□ -1.46
LIG1P18858 CBWD4P-201ENST00000445695 655 ntBASIC5.94□□□□□ -1.46
LIG1P18858 BTF3P6-201ENST00000448054 499 ntBASIC5.94□□□□□ -1.46
LIG1P18858 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.94□□□□□ -1.46
LIG1P18858 AC079168.1-201ENST00000458741 345 ntBASIC5.94□□□□□ -1.46
LIG1P18858 RNU6-261P-201ENST00000459506 102 ntBASIC5.94□□□□□ -1.46
LIG1P18858 RN7SL189P-201ENST00000468631 289 ntBASIC5.94□□□□□ -1.46
LIG1P18858 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIG1P18858 RN7SL447P-201ENST00000494711 245 ntBASIC5.94□□□□□ -1.46
LIG1P18858 PGAM1P13-201ENST00000507497 754 ntBASIC5.94□□□□□ -1.46
LIG1P18858 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.94□□□□□ -1.46
LIG1P18858 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms