Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 FTH1P1-201ENST00000437933 532 ntBASIC2.77□□□□□ -1.97
TNFP01375 RPS7P5-201ENST00000441482 581 ntBASIC2.77□□□□□ -1.97
TNFP01375 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 SLC31A1P1-201ENST00000451221 567 ntBASIC2.77□□□□□ -1.97
TNFP01375 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 AP001025.2-201ENST00000490908 477 ntBASIC2.77□□□□□ -1.97
TNFP01375 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.77□□□□□ -1.97
TNFP01375 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TNFP01375 AP004242.1-201ENST00000533701 349 ntBASIC2.77□□□□□ -1.97
TNFP01375 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
TNFP01375 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.77□□□□□ -1.97
TNFP01375 OR4T1P-201ENST00000554933 911 ntBASIC2.77□□□□□ -1.97
TNFP01375 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.77□□□□□ -1.97
TNFP01375 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.77□□□□□ -1.97
TNFP01375 HMGB1P6-201ENST00000569046 646 ntBASIC2.77□□□□□ -1.97
TNFP01375 MIR4319-201ENST00000577285 85 ntBASIC2.77□□□□□ -1.97
TNFP01375 FAM106CP-201ENST00000582212 507 ntBASIC2.77□□□□□ -1.97
TNFP01375 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFP01375 AC007619.2-201ENST00000605743 379 ntBASIC2.77□□□□□ -1.97
TNFP01375 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TNFP01375 AC048347.1-201ENST00000624621 427 ntBASIC2.77□□□□□ -1.97
TNFP01375 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
TNFP01375 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
TNFP01375 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
TNFP01375 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TNFP01375 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 RN7SKP58-201ENST00000411010 305 ntBASIC2.76□□□□□ -1.97
TNFP01375 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.76□□□□□ -1.97
TNFP01375 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 RPL30P3-201ENST00000424262 333 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC019097.1-201ENST00000424783 735 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC063976.3-201ENST00000426849 329 ntBASIC2.76□□□□□ -1.97
TNFP01375 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.76□□□□□ -1.97
TNFP01375 PTGES3P5-201ENST00000455109 434 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC093278.1-201ENST00000494700 600 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.76□□□□□ -1.97
TNFP01375 AC117522.3-201ENST00000507974 584 ntBASIC2.76□□□□□ -1.97
TNFP01375 RPL12P22-201ENST00000519073 490 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC245166.1-201ENST00000521012 253 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC022790.1-201ENST00000522872 204 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.76□□□□□ -1.97
TNFP01375 NPM1P35-201ENST00000533043 868 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 AC096947.1-201ENST00000603233 470 ntBASIC2.76□□□□□ -1.97
TNFP01375 AC011468.4-201ENST00000603942 409 ntBASIC2.76□□□□□ -1.97
TNFP01375 AL359535.1-201ENST00000612100 1087 ntBASIC2.76□□□□□ -1.97
TNFP01375 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TNFP01375 AC006111.3-201ENST00000622137 383 ntBASIC2.76□□□□□ -1.97
TNFP01375 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.76□□□□□ -1.97
TNFP01375 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.76□□□□□ -1.97
TNFP01375 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
TNFP01375 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TNFP01375 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFP01375 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TNFP01375 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.75□□□□□ -1.97
TNFP01375 RNA5SP105-201ENST00000391123 113 ntBASIC2.75□□□□□ -1.97
TNFP01375 AL592148.1-201ENST00000413568 445 ntBASIC2.75□□□□□ -1.97
TNFP01375 MTND2P16-201ENST00000419987 799 ntBASIC2.75□□□□□ -1.97
TNFP01375 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.75□□□□□ -1.97
TNFP01375 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.75□□□□□ -1.97
TNFP01375 SNORD109B-201ENST00000458961 67 ntBASIC2.75□□□□□ -1.97
TNFP01375 SNORD109A-201ENST00000459128 67 ntBASIC2.75□□□□□ -1.97
TNFP01375 AC092754.2-201ENST00000463506 460 ntBASIC2.75□□□□□ -1.97
TNFP01375 AC010265.1-201ENST00000513509 211 ntBASIC2.75□□□□□ -1.97
TNFP01375 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.75□□□□□ -1.97
TNFP01375 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFP01375 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFP01375 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFP01375 AC010198.2-201ENST00000550612 259 ntBASIC2.75□□□□□ -1.97
TNFP01375 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFP01375 SAGE4P-201ENST00000442271 3381 ntBASIC2.74□□□□□ -1.97
TNFP01375 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFP01375 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TNFP01375 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TNFP01375 AC062016.1-201ENST00000355719 319 ntBASIC2.74□□□□□ -1.97
TNFP01375 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
TNFP01375 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.74□□□□□ -1.97
TNFP01375 MTND4LP21-201ENST00000415303 295 ntBASIC2.74□□□□□ -1.97
TNFP01375 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.74□□□□□ -1.97
TNFP01375 AC009969.1-201ENST00000438726 172 ntBASIC2.74□□□□□ -1.97
TNFP01375 AC112653.1-201ENST00000443851 386 ntBASIC2.74□□□□□ -1.97
TNFP01375 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFP01375 AC078817.1-201ENST00000492623 435 ntBASIC2.74□□□□□ -1.97
TNFP01375 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
TNFP01375 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.74□□□□□ -1.97
TNFP01375 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.74□□□□□ -1.97
TNFP01375 AC034159.1-201ENST00000513885 583 ntBASIC2.74□□□□□ -1.97
TNFP01375 AC103783.1-201ENST00000520506 373 ntBASIC2.74□□□□□ -1.97
TNFP01375 AC087276.1-201ENST00000529659 480 ntBASIC2.74□□□□□ -1.97
TNFP01375 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.74□□□□□ -1.97
TNFP01375 AC079600.2-201ENST00000550076 130 ntBASIC2.74□□□□□ -1.97
TNFP01375 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms