Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC011352.3-201ENST00000505162 593 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC007115.1-201ENST00000546853 234 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC063950.1-201ENST00000552036 308 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC115085.1-201ENST00000588924 229 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AP001981.2-201ENST00000603241 418 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC091946.2-201ENST00000606105 291 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC245297.2-201ENST00000610119 565 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC013562.2-201ENST00000611632 603 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC243312.2-201ENST00000623340 601 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC026634.1-201ENST00000634369 198 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 PCMTD1P7-201ENST00000634506 357 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 DDX43P2-201ENST00000604753 1354 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 SNORA5.1-201ENST00000384275 131 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 Y_RNA.500-201ENST00000384466 111 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 Y_RNA.505-201ENST00000384489 102 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 Z99497.1-201ENST00000421282 135 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 RN7SL601P-201ENST00000471221 293 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 SETP11-201ENST00000473027 690 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC017015.1-201ENST00000477387 286 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC104685.1-201ENST00000502445 371 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 HMGB3P16-201ENST00000508037 287 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC087369.1-201ENST00000520775 996 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AF279873.1-201ENST00000523393 313 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 SMARCE1P4-201ENST00000523647 241 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC115621.1-201ENST00000604653 858 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC006270.3-201ENST00000605967 1036 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC008083.4-201ENST00000615076 444 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC244258.1-201ENST00000637553 1071 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 AC119674.1-207ENST00000641355 633 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAPGEF3O95398 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RAPGEF3O95398 AP001273.1-201ENST00000624493 3152 ntBASIC5.93□□□□□ -1.46
RAPGEF3O95398 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAPGEF3O95398 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC107027.3-201ENST00000565095 3473 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AP002001.2-201ENST00000529025 1469 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAPGEF3O95398 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAPGEF3O95398 Y_RNA.18-201ENST00000362461 102 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 RBMY1KP-201ENST00000423480 476 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 Z74696.2-201ENST00000436514 498 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 TAF9P1-201ENST00000445421 515 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 TAF9P2-201ENST00000454958 515 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 UBDP1-202ENST00000457888 382 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC104689.1-201ENST00000473356 768 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 UBE2DNL-203ENST00000474922 222 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 MTND4P2-201ENST00000507767 1203 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 HSPE1P23-201ENST00000509838 286 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 FTH1P9-201ENST00000513251 355 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 RNU6-1261P-201ENST00000517194 104 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 FTH1P11-201ENST00000517577 551 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC027309.2-201ENST00000520566 192 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC106038.2-201ENST00000520706 568 ntBASIC5.92□□□□□ -1.46
RAPGEF3O95398 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.92□□□□□ -1.46
RAPGEF3O95398 AC138915.2-201ENST00000569776 97 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms