Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC009117.1-201ENST00000563948 554 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RN7SL652P-201ENST00000577769 300 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 MTND1P15-201ENST00000579262 949 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC112191.3-201ENST00000604371 277 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PHGDHO43175 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC104010.1-201ENST00000616889 150 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AC016769.4-201ENST00000616893 535 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AC040168.1-201ENST00000623594 991 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AL603839.4-201ENST00000624658 1005 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC092447.10-201ENST00000620607 1652 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
PHGDHO43175 Y_RNA.234-201ENST00000364409 97 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 RNA5SP151-201ENST00000365632 117 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 RNU6-356P-201ENST00000384140 107 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 Y_RNA.517-201ENST00000384551 106 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 RN7SKP167-201ENST00000411047 285 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 COX6B1P1-201ENST00000415962 213 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC127526.1-201ENST00000417526 366 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 USP9YP13-201ENST00000417797 480 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC004690.1-201ENST00000418216 328 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 RPL21P91-201ENST00000429231 479 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 PSMD10P3-201ENST00000437000 448 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AL033528.1-201ENST00000453780 140 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC063943.1-201ENST00000465434 453 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 RPL36AP41-201ENST00000493820 306 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC112204.1-201ENST00000502591 103 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 RNU6-405P-201ENST00000516637 110 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AP003385.6-201ENST00000531603 374 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC091178.1-203ENST00000584586 279 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC015871.2-201ENST00000603605 948 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AL391358.1-201ENST00000605342 190 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC006566.1-201ENST00000608943 513 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC005332.10-201ENST00000612725 619 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC026585.1-201ENST00000619582 524 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC018445.2-201ENST00000622987 260 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 AC091925.2-201ENST00000625059 256 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC055839.1-201ENST00000634467 498 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.57□□□□□ -1.68
PHGDHO43175 MAPK10-263ENST00000641052 4307 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.57□□□□□ -1.68
PHGDHO43175 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PHGDHO43175 MTCO1P24-201ENST00000515438 1558 ntBASIC4.57□□□□□ -1.68
PHGDHO43175 CCT4P2-201ENST00000233836 1548 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 NMD3P1-201ENST00000439704 1488 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC022893.2-201ENST00000564832 3296 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.56□□□□□ -1.68
PHGDHO43175 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PHGDHO43175 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.56□□□□□ -1.68
PHGDHO43175 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 RNA5SP258-201ENST00000362750 119 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RNU6-989P-201ENST00000362756 107 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RN7SKP115-201ENST00000363177 317 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RNU6-1207P-201ENST00000384343 107 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RNU6-348P-201ENST00000384386 107 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RNU6-192P-201ENST00000391253 100 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.56□□□□□ -1.68
PHGDHO43175 AC140479.3-201ENST00000418944 1126 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RPS12P5-201ENST00000423449 371 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms