Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.03□□□□□ -1.6
CUX2O14529 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CUX2O14529 HSPA8P1-201ENST00000425843 1833 ntBASIC5.02□□□□□ -1.61
CUX2O14529 SNORA9.2-201ENST00000365361 133 ntBASIC5.02□□□□□ -1.61
CUX2O14529 Y_RNA.355-201ENST00000365462 98 ntBASIC5.02□□□□□ -1.61
CUX2O14529 RNA5SP105-201ENST00000391123 113 ntBASIC5.02□□□□□ -1.61
CUX2O14529 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.02□□□□□ -1.61
CUX2O14529 RNU4-26P-201ENST00000410270 107 ntBASIC5.02□□□□□ -1.61
CUX2O14529 RAC1P3-201ENST00000416129 580 ntBASIC5.02□□□□□ -1.61
CUX2O14529 AC009963.1-201ENST00000417265 157 ntBASIC5.02□□□□□ -1.61
CUX2O14529 RPL7P10-201ENST00000417407 739 ntBASIC5.02□□□□□ -1.61
CUX2O14529 Z98742.3-201ENST00000418637 326 ntBASIC5.02□□□□□ -1.61
CUX2O14529 AC009414.1-201ENST00000427200 443 ntBASIC5.02□□□□□ -1.61
CUX2O14529 BX679664.1-201ENST00000434429 253 ntBASIC5.02□□□□□ -1.61
CUX2O14529 C1DP3-201ENST00000455013 423 ntBASIC5.02□□□□□ -1.61
CUX2O14529 RPL31P53-201ENST00000457065 348 ntBASIC5.02□□□□□ -1.61
CUX2O14529 RPL23AP70-201ENST00000483361 460 ntBASIC5.02□□□□□ -1.61
CUX2O14529 AC092436.1-201ENST00000506450 503 ntBASIC5.02□□□□□ -1.61
CUX2O14529 AC008565.1-201ENST00000509046 885 ntBASIC5.02□□□□□ -1.61
CUX2O14529 SERPINE4P-201ENST00000554978 281 ntBASIC5.02□□□□□ -1.61
CUX2O14529 TGIF1P1-201ENST00000558095 802 ntBASIC5.02□□□□□ -1.61
CUX2O14529 AL392112.1-201ENST00000605115 829 ntBASIC5.02□□□□□ -1.61
CUX2O14529 AC074140.1-201ENST00000621617 208 ntBASIC5.02□□□□□ -1.61
CUX2O14529 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUX2O14529 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CUX2O14529 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.02□□□□□ -1.61
CUX2O14529 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUX2O14529 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUX2O14529 MTND4P10-201ENST00000446199 1363 ntBASIC5.02□□□□□ -1.61
CUX2O14529 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUX2O14529 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CUX2O14529 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUX2O14529 RNU4-23P-201ENST00000362839 140 ntBASIC5.01□□□□□ -1.61
CUX2O14529 AL139039.1-201ENST00000401900 692 ntBASIC5.01□□□□□ -1.61
CUX2O14529 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.01□□□□□ -1.61
CUX2O14529 AL591623.2-201ENST00000449978 222 ntBASIC5.01□□□□□ -1.61
CUX2O14529 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.01□□□□□ -1.61
CUX2O14529 RNU6-319P-201ENST00000516025 108 ntBASIC5.01□□□□□ -1.61
CUX2O14529 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUX2O14529 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CUX2O14529 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.01□□□□□ -1.61
CUX2O14529 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.01□□□□□ -1.61
CUX2O14529 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.01□□□□□ -1.61
CUX2O14529 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CUX2O14529 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUX2O14529 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CUX2O14529 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CUX2O14529 OR10AB1P-202ENST00000641219 1686 ntBASIC5.01□□□□□ -1.61
CUX2O14529 RNU6-1320P-201ENST00000390838 107 ntBASIC5□□□□□ -1.61
CUX2O14529 RNU6-1269P-201ENST00000391139 107 ntBASIC5□□□□□ -1.61
CUX2O14529 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 HMGB3P11-201ENST00000440127 604 ntBASIC5□□□□□ -1.61
CUX2O14529 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 RNU6-599P-201ENST00000459383 107 ntBASIC5□□□□□ -1.61
CUX2O14529 RNU6-1193P-201ENST00000459461 107 ntBASIC5□□□□□ -1.61
CUX2O14529 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5□□□□□ -1.61
CUX2O14529 RN7SKP219-201ENST00000516825 296 ntBASIC5□□□□□ -1.61
CUX2O14529 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 FAM60CP-201ENST00000591086 664 ntBASIC5□□□□□ -1.61
CUX2O14529 AC025946.2-201ENST00000603398 234 ntBASIC5□□□□□ -1.61
CUX2O14529 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CUX2O14529 RNU6-368P-201ENST00000620928 107 ntBASIC5□□□□□ -1.61
CUX2O14529 RNU6-538P-201ENST00000622329 107 ntBASIC5□□□□□ -1.61
CUX2O14529 CTSLP2-204ENST00000629029 392 ntBASIC5□□□□□ -1.61
CUX2O14529 GABRG2-229ENST00000641017 3628 ntBASIC5□□□□□ -1.61
CUX2O14529 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5□□□□□ -1.61
CUX2O14529 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CUX2O14529 AC012020.1-201ENST00000624541 1728 ntBASIC5□□□□□ -1.61
CUX2O14529 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5□□□□□ -1.61
CUX2O14529 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CUX2O14529 AMD1P2-201ENST00000412936 992 ntBASIC5□□□□□ -1.61
CUX2O14529 AL135786.1-201ENST00000415892 214 ntBASIC5□□□□□ -1.61
CUX2O14529 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5□□□□□ -1.61
CUX2O14529 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5□□□□□ -1.61
CUX2O14529 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5□□□□□ -1.61
CUX2O14529 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5□□□□□ -1.61
CUX2O14529 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 AC027176.1-201ENST00000560204 514 ntBASIC5□□□□□ -1.61
CUX2O14529 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5□□□□□ -1.61
CUX2O14529 AC025034.2-201ENST00000623264 286 ntBASIC5□□□□□ -1.61
CUX2O14529 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.99□□□□□ -1.61
CUX2O14529 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.99□□□□□ -1.61
CUX2O14529 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.99□□□□□ -1.61
CUX2O14529 MIR7-2-201ENST00000384970 110 ntBASIC4.99□□□□□ -1.61
CUX2O14529 RPS12P18-201ENST00000442381 270 ntBASIC4.99□□□□□ -1.61
CUX2O14529 RAD1P2-201ENST00000446414 663 ntBASIC4.99□□□□□ -1.61
CUX2O14529 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CUX2O14529 RNU1-143P-201ENST00000516296 146 ntBASIC4.99□□□□□ -1.61
CUX2O14529 RN7SKP60-201ENST00000516985 239 ntBASIC4.99□□□□□ -1.61
CUX2O14529 OR5G4P-201ENST00000525251 760 ntBASIC4.99□□□□□ -1.61
CUX2O14529 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CUX2O14529 AC078814.3-201ENST00000553036 491 ntBASIC4.99□□□□□ -1.61
CUX2O14529 MIR4498-201ENST00000577599 66 ntBASIC4.99□□□□□ -1.61
CUX2O14529 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.99□□□□□ -1.61
CUX2O14529 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.99□□□□□ -1.61
CUX2O14529 AL135786.2-201ENST00000608422 615 ntBASIC4.99□□□□□ -1.61
CUX2O14529 U1.23-201ENST00000610293 146 ntBASIC4.99□□□□□ -1.61
CUX2O14529 RNU1-68P-201ENST00000615382 146 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms