Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 TPT1P2-201ENST00000413105 503 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC099677.1-201ENST00000420575 175 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL592293.2-201ENST00000422292 996 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 PSMA6P3-201ENST00000428242 164 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 HIGD1AP4-201ENST00000430194 280 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC016712.1-201ENST00000431088 378 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 USP9YP35-201ENST00000435696 412 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 SNRPEP7-201ENST00000438350 220 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL591719.1-201ENST00000444669 744 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 Z95327.1-201ENST00000446082 482 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 NECAP1P2-201ENST00000455668 727 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 RNA5SP246-201ENST00000458909 119 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM4A7MD48 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC006499.2-201ENST00000513470 337 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC099522.1-202ENST00000514718 367 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 SNORA3.4-201ENST00000515969 96 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 RNU7-143P-201ENST00000516781 65 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 DEFB131D-201ENST00000526803 184 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 MTCYBP41-201ENST00000528913 1123 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL121603.1-201ENST00000553815 142 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL360157.1-201ENST00000565962 87 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL354943.1-201ENST00000572103 781 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 MAGOH2P-202ENST00000584384 429 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AL158042.1-201ENST00000605338 460 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC112220.3-201ENST00000605502 502 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC006023.2-201ENST00000609916 167 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC079395.3-201ENST00000615161 484 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC103858.2-201ENST00000621471 543 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC040168.1-201ENST00000623594 991 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AP000676.4-201ENST00000624659 623 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC019226.2-201ENST00000625973 424 ntBASIC3.31□□□□□ -1.88
SRRM4A7MD48 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM4A7MD48 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM4A7MD48 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM4A7MD48 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM4A7MD48 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SRRM4A7MD48 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC012020.1-201ENST00000624541 1728 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM4A7MD48 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM4A7MD48 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM4A7MD48 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM4A7MD48 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 RNU6-989P-201ENST00000362756 107 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 RNU6-157P-201ENST00000383957 107 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 RNU6-83P-201ENST00000384568 112 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 MIR937-201ENST00000401271 86 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL138880.1-201ENST00000405824 642 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 SNORA3C-201ENST00000408792 125 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 MTCYBP38-201ENST00000417160 1123 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC009480.2-201ENST00000422916 432 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL953862.1-201ENST00000423016 168 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 COX6B1P7-201ENST00000430845 235 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL358472.1-201ENST00000431295 329 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 RPL23AP46-201ENST00000438548 490 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AL121871.1-201ENST00000443413 436 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 RSL24D1P3-201ENST00000449255 495 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 RN7SL481P-201ENST00000477764 299 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 TMED11P-201ENST00000479478 690 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM4A7MD48 MTCYBP17-201ENST00000503579 789 ntBASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM4A7MD48 AC112673.1-201ENST00000513168 575 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms