Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PABPC1P8-201ENST00000452851 2086 ntBASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.25□□□□□ -1.41
TMEM88BA6NKF7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC022034.1-201ENST00000512867 2156 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 SNORD81.2-201ENST00000365153 76 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 Y_RNA.367-201ENST00000365544 101 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 RNU6-641P-201ENST00000384006 107 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 FABP5P2-201ENST00000439042 408 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 RPL21P89-201ENST00000444021 467 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC104634.1-201ENST00000452720 462 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 CACYBPP2-201ENST00000453625 678 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 RPL36AP13-201ENST00000457490 317 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 RPL7P19-201ENST00000469948 618 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC087241.2-201ENST00000535801 324 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 SETP7-201ENST00000552169 453 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC011611.1-201ENST00000552179 197 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC068831.4-201ENST00000556118 109 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AL049779.3-201ENST00000557141 606 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 MIR4795-201ENST00000584182 89 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AL008729.2-201ENST00000606393 473 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 uc_338.11-201ENST00000619132 160 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 ZNF33CP-201ENST00000432492 2030 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 AL157700.1-201ENST00000561973 1432 ntBASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TMEM88BA6NKF7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 RNA5SP428-201ENST00000365129 132 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 RNU6-432P-201ENST00000384196 109 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 SNORA57.1-201ENST00000391227 145 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 RNU6-516P-201ENST00000411381 104 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 RNF10P1-201ENST00000418589 369 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 MTCO3P46-201ENST00000425787 232 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AL359265.2-201ENST00000434367 631 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 KNOP1P3-201ENST00000446933 426 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 RPS17P13-201ENST00000448974 407 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 BX842559.2-201ENST00000451418 605 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AC021660.1-201ENST00000465006 554 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AC126389.1-201ENST00000477436 290 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 HMGN1P13-201ENST00000505795 138 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AP003385.6-201ENST00000531603 374 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 DHX40P1-201ENST00000588725 1412 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.23□□□□□ -1.41
TMEM88BA6NKF7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms