Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR2AS1P-201ENST00000427827 319 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL035246.1-201ENST00000433554 1255 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC122718.1-201ENST00000439448 744 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 HMGB3P6-201ENST00000444896 598 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC012181.1-201ENST00000479895 423 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC006483.1-201ENST00000487308 313 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC093663.1-201ENST00000497190 394 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 IGKV2D-36-201ENST00000518643 226 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 EIF5A2P1-201ENST00000564027 460 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC107954.1-201ENST00000565906 727 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL162713.1-201ENST00000604480 262 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL355802.4-201ENST00000607635 548 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC024941.1-201ENST00000612250 334 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AC068831.8-201ENST00000620171 435 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL356490.1-201ENST00000623079 479 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPAQ9P0L0 AL359893.1-201ENST00000447628 1580 ntBASIC3.04□□□□□ -1.92
VAPAQ9P0L0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 RNU6-543P-201ENST00000362576 108 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 RN7SKP227-201ENST00000364445 330 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 SNORD115-48-201ENST00000364764 76 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AL121972.1-201ENST00000402023 252 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 HSPD1P21-201ENST00000436541 245 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 HMGN2P20-201ENST00000437531 273 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 RPS12P18-201ENST00000442381 270 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC008280.2-201ENST00000455473 307 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 ARPC3P2-201ENST00000457786 533 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 RPL21P104-201ENST00000464143 478 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 RPS27AP1-201ENST00000475545 471 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 HMGN1P15-201ENST00000513870 295 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AP001207.1-201ENST00000524051 481 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC109635.4-202ENST00000531666 412 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC084824.1-201ENST00000550917 1005 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 MIR4276-201ENST00000584832 70 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC025016.1-201ENST00000616746 682 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC090617.9-201ENST00000623751 147 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 AC244258.1-201ENST00000637553 1071 ntBASIC3.03□□□□□ -1.92
VAPAQ9P0L0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
VAPAQ9P0L0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.03□□□□□ -1.93
VAPAQ9P0L0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 MTND4P34-201ENST00000572715 1371 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 RNU6-374P-201ENST00000364146 108 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 BX323014.1-201ENST00000412876 237 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 BX842559.1-201ENST00000419615 532 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 RFESDP1-201ENST00000422350 461 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AL590623.1-201ENST00000427864 105 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 ZNF965P-201ENST00000432501 817 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 OR2B8P-201ENST00000432841 938 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 HSPE1P28-201ENST00000443139 211 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 ELOCP13-201ENST00000443934 329 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 NECAP1P2-201ENST00000455668 727 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC087879.1-201ENST00000474343 374 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC021678.1-201ENST00000505195 936 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 IGKV2D-19-201ENST00000523346 262 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms