Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC002525.1-201ENST00000624392 1622 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 OR11H4-201ENST00000315409 1082 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 MIR133A2-201ENST00000347538 102 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RNU4-73P-201ENST00000363164 141 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RNU6-1103P-201ENST00000384150 107 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 SNORA48.7-201ENST00000391302 135 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 SNRPEP2-201ENST00000397592 279 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AL357515.1-201ENST00000402967 542 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 MIR320C1-201ENST00000408566 88 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RNU2-6P-201ENST00000411404 190 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 SPA17P1-201ENST00000416656 452 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 HMGB3P20-201ENST00000417997 600 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC099563.1-201ENST00000456086 418 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 OR6K1P-201ENST00000456766 971 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 BTF3P5-201ENST00000457252 467 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC006511.1-201ENST00000470614 315 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC106872.3-201ENST00000495104 446 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC112204.1-201ENST00000502591 103 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RNA5SP464-201ENST00000516251 108 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 CENPUP1-201ENST00000526649 1202 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC090502.2-201ENST00000549267 280 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AL359212.1-201ENST00000556608 614 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC023575.1-201ENST00000580510 358 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 MIR6716-201ENST00000613413 80 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 BX005214.3-202ENST00000619809 325 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AL161637.1-201ENST00000622380 412 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC091905.1-201ENST00000624400 311 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC006065.6-201ENST00000625201 545 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC108751.5-201ENST00000492880 1336 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 AC093849.1-201ENST00000563631 2209 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 RNU6-251P-201ENST00000363235 104 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 SNORD113.2-201ENST00000364166 89 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 Y_RNA.279-201ENST00000364763 95 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 RNU6-657P-201ENST00000383904 107 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 RNU2-28P-201ENST00000410457 189 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 RPS20P15-201ENST00000412792 311 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 EEF1A1P40-201ENST00000412883 573 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 ZNF90P2-204ENST00000419323 1075 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 PIGFP2-201ENST00000421400 651 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AL645608.4-201ENST00000423619 154 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 C1DP4-201ENST00000455429 424 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 MTCO1P42-201ENST00000457379 726 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AC022364.2-201ENST00000457963 554 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 MTND1P3-201ENST00000484956 952 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AC007182.2-201ENST00000489251 402 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 SCARNA22-201ENST00000503991 125 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 RPL23AP53-201ENST00000521854 457 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AP003122.4-201ENST00000530980 758 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AL512310.1-201ENST00000548639 172 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 CBX3P5-201ENST00000552017 521 ntBASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM7Q9NR12 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms