Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MTND1P28-201ENST00000435623 950 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC092641.1-201ENST00000440229 772 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.29□□□□□ -1.88
VGLL1Q99990 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.29□□□□□ -1.88
VGLL1Q99990 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 USP9YP10-201ENST00000454868 628 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AC092324.1-201ENST00000468671 324 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC011005.3-201ENST00000491624 395 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 MTCYBP17-201ENST00000503579 789 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC010460.1-201ENST00000507087 466 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 USP9YP5-201ENST00000511770 630 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 IGHV3-32-201ENST00000519182 355 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 DEFB131D-201ENST00000526803 184 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AC137768.1-201ENST00000549998 553 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 CR383656.6-201ENST00000550518 394 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 CYCSP2-201ENST00000558168 301 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 MIR4644-201ENST00000579929 84 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AC079089.3-201ENST00000603094 673 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AL596327.1-201ENST00000603629 213 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC087241.4-201ENST00000612441 480 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 Z99129.1-201ENST00000612510 255 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.29□□□□□ -1.88
VGLL1Q99990 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AL357080.1-201ENST00000617394 239 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.29□□□□□ -1.88
VGLL1Q99990 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 LINC00561-201ENST00000565815 2738 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.29□□□□□ -1.88
VGLL1Q99990 PABPC1P9-201ENST00000426076 1612 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.29□□□□□ -1.88
VGLL1Q99990 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VGLL1Q99990 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VGLL1Q99990 AL445437.1-201ENST00000623157 3087 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VGLL1Q99990 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VGLL1Q99990 ZNF37BP-203ENST00000452306 1352 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VGLL1Q99990 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VGLL1Q99990 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 SNRPEP3-201ENST00000338402 276 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 RNU4-91P-201ENST00000364778 135 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VGLL1Q99990 RNU6-657P-201ENST00000383904 107 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 Y_RNA.517-201ENST00000384551 106 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 GLULP6-201ENST00000399502 913 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 RN7SKP106-201ENST00000410832 272 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.28□□□□□ -1.88
VGLL1Q99990 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.28□□□□□ -1.88
VGLL1Q99990 AL953862.1-201ENST00000423016 168 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 UBE2FP3-201ENST00000436366 524 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 RPL12P3-201ENST00000440080 396 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.28□□□□□ -1.88
VGLL1Q99990 MTCO2P3-201ENST00000442543 421 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.28□□□□□ -1.88
VGLL1Q99990 COX6CP12-201ENST00000446748 202 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 RPL26P28-201ENST00000451325 435 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 NDUFA5P7-201ENST00000452914 242 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.28□□□□□ -1.88
VGLL1Q99990 RNA5SP269-201ENST00000459032 137 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AC096751.1-202ENST00000502691 1067 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 MTND2P33-201ENST00000506452 1031 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.28□□□□□ -1.88
VGLL1Q99990 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VGLL1Q99990 AC006499.2-201ENST00000513470 337 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 OR7H2P-201ENST00000513483 306 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 RNU6-583P-201ENST00000516012 92 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 IGKV2D-23-201ENST00000518179 286 ntBASIC3.28□□□□□ -1.88
VGLL1Q99990 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.28□□□□□ -1.88
VGLL1Q99990 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.28□□□□□ -1.88
VGLL1Q99990 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms