Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC093853.1-201ENST00000515689 483 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 OR5AQ1P-201ENST00000527596 927 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC024224.1-201ENST00000538284 609 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.18□□□□□ -1.9
LITAFQ99732 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.18□□□□□ -1.9
LITAFQ99732 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.18□□□□□ -1.9
LITAFQ99732 AL845552.1-201ENST00000556820 323 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 MRPL45P2-203ENST00000573318 473 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 MIR4716-201ENST00000579628 84 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AP005119.2-201ENST00000579735 1105 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 AC011477.5-201ENST00000586571 259 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.18□□□□□ -1.9
LITAFQ99732 HMGB2P1-201ENST00000591146 634 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC011468.4-201ENST00000603942 409 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AP000907.4-201ENST00000604143 237 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AL365503.1-201ENST00000605247 905 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC113194.1-201ENST00000606037 500 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AL008729.2-201ENST00000606393 473 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC011816.2-201ENST00000607089 556 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AC104458.1-201ENST00000608243 463 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 MIR6883-201ENST00000614952 78 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 AL591926.8-201ENST00000616876 211 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.18□□□□□ -1.9
LITAFQ99732 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LITAFQ99732 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 SMG1P6-201ENST00000532337 2930 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 OR13C1P-202ENST00000641378 2919 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LITAFQ99732 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.18□□□□□ -1.9
LITAFQ99732 AL451142.2-201ENST00000429076 2090 ntBASIC3.18□□□□□ -1.9
LITAFQ99732 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.18□□□□□ -1.9
LITAFQ99732 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LITAFQ99732 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LITAFQ99732 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LITAFQ99732 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.17□□□□□ -1.9
LITAFQ99732 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.17□□□□□ -1.9
LITAFQ99732 FRG1BP-201ENST00000278882 761 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LITAFQ99732 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LITAFQ99732 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 Y_RNA.1-201ENST00000352915 104 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 RNA5SP319-201ENST00000362768 119 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 Y_RNA.402-201ENST00000383972 102 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 RNU6-178P-201ENST00000384631 104 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 MIR551B-201ENST00000384984 96 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 MIR600-201ENST00000385007 98 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 MIR513A2-201ENST00000385249 127 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AL359704.1-201ENST00000411586 781 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 MTND3P17-201ENST00000416968 344 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.17□□□□□ -1.9
LITAFQ99732 AC004552.1-201ENST00000419089 348 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.17□□□□□ -1.9
LITAFQ99732 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LITAFQ99732 OR2B7P-201ENST00000429302 934 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.17□□□□□ -1.9
LITAFQ99732 CBX1P1-201ENST00000440184 427 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.17□□□□□ -1.9
LITAFQ99732 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.17□□□□□ -1.9
LITAFQ99732 AL161636.2-201ENST00000445179 927 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 NFU1P2-201ENST00000448700 469 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.17□□□□□ -1.9
LITAFQ99732 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.17□□□□□ -1.9
LITAFQ99732 AP1S2P1-201ENST00000457344 379 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 RN7SL515P-201ENST00000463999 297 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AC104339.1-201ENST00000465478 348 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 RPS26P3-201ENST00000470205 348 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.17□□□□□ -1.9
LITAFQ99732 AC022034.3-201ENST00000471393 478 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AC023598.1-201ENST00000472521 361 ntBASIC3.17□□□□□ -1.9
LITAFQ99732 AC090543.2-201ENST00000483963 348 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms