Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 OR7E13P-201ENST00000526052 910 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC018630.1-201ENST00000541376 925 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC023813.2-201ENST00000564321 469 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC090425.2-201ENST00000608818 501 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC243773.3-201ENST00000613270 256 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL355480.1-201ENST00000629041 99 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC139713.2-214ENST00000642059 1811 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 MAPK10-372ENST00000641954 3413 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC116667.1-201ENST00000604855 2072 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 ZNF29P-201ENST00000225587 168 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RNU1-132P-201ENST00000364300 164 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RNU6-621P-201ENST00000364752 109 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RNU6-398P-201ENST00000384143 109 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RNU6-906P-201ENST00000384700 70 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RPS3AP23-201ENST00000401762 784 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 HMGB1P17-201ENST00000403495 628 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RPL23AP26-201ENST00000412728 464 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC119751.6-201ENST00000416712 186 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 NIPA2P1-201ENST00000426223 976 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RPS29P17-201ENST00000430795 166 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 EZH2P1-201ENST00000431167 291 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 HMGB1P12-201ENST00000438594 598 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AL009048.1-201ENST00000450437 298 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AL024509.2-201ENST00000493462 493 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RPL29P14-201ENST00000495837 428 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC090695.1-201ENST00000561269 1222 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 OR4K7P-201ENST00000580232 945 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 MIR4715-201ENST00000584117 79 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 MTCO2P2-201ENST00000591258 225 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AL161729.3-201ENST00000603533 673 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 MTND3P19-201ENST00000603825 345 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AL451074.6-201ENST00000608512 729 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC107075.1-201ENST00000613695 314 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC090897.3-201ENST00000636973 1157 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 RPS4XP5-202ENST00000449995 1334 ntBASIC3.87□□□□□ -1.79
VPS33AQ96AX1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS33AQ96AX1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RN7SKP182-201ENST00000410772 298 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 PSMA6P3-201ENST00000428242 164 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 MTND2P5-201ENST00000432656 1006 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RPL18AP17-201ENST00000455326 198 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 CEACAMP4-201ENST00000457676 421 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RNA5SP246-201ENST00000458909 119 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RPL7P38-201ENST00000488396 739 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC090453.1-201ENST00000495560 436 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 SETP14-201ENST00000497538 873 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 GTF2IP9-201ENST00000502460 301 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC006390.1-201ENST00000508068 283 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC026726.1-201ENST00000512859 601 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 AC108064.1-201ENST00000513791 460 ntBASIC3.86□□□□□ -1.79
VPS33AQ96AX1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS33AQ96AX1 RNU6-583P-201ENST00000516012 92 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms