Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RN7SL356P-201ENST00000582228 248 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AC106900.2-201ENST00000604994 317 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AC109583.2-201ENST00000617367 129 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 MIR6826-201ENST00000617808 98 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AL691477.1-201ENST00000624398 162 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AL133216.2-202ENST00000634512 349 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 AL078621.3-201ENST00000623707 2042 ntBASIC5.05□□□□□ -1.6
NUP43Q8NFH3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP43Q8NFH3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC133552.1-201ENST00000569988 4007 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RNA5SP319-201ENST00000362768 119 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RNU4-20P-201ENST00000365601 151 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RNU6-831P-201ENST00000384548 107 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RNA5SP241-201ENST00000391326 114 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC079809.1-201ENST00000415468 276 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC012065.2-201ENST00000421295 375 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 MTND3P2-201ENST00000438452 342 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AL138799.3-201ENST00000438968 350 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AL390119.1-201ENST00000440329 312 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AL161636.2-201ENST00000445179 927 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 MTND3P16-201ENST00000452205 344 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC007547.1-201ENST00000462177 490 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RN7SL51P-201ENST00000468230 285 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC055855.1-201ENST00000489563 579 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC008638.1-201ENST00000506035 866 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 KLHL2P1-201ENST00000508691 521 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC110792.2-201ENST00000510278 224 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC021146.1-201ENST00000511202 716 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 TTC39CP1-201ENST00000512513 755 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 BTF3P13-201ENST00000513224 490 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 SNORD27.1-201ENST00000516319 72 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 SUMO2P20-201ENST00000520803 283 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AP004607.2-201ENST00000533949 322 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RN7SL290P-201ENST00000578661 300 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 RNU6-89P-201ENST00000606519 100 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC009318.4-201ENST00000620496 486 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC079684.1-201ENST00000621405 437 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC074140.1-201ENST00000621617 208 ntBASIC5.04□□□□□ -1.6
NUP43Q8NFH3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP43Q8NFH3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 XPOTP1-201ENST00000443317 2398 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 MIR133A2-201ENST00000347538 102 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 MIR369-201ENST00000362155 70 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 RNU1-19P-201ENST00000363306 165 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 Y_RNA.144-201ENST00000363521 113 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP43Q8NFH3 Y_RNA.422-201ENST00000384054 114 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 SNORA5.1-201ENST00000384275 131 ntBASIC5.03□□□□□ -1.6
NUP43Q8NFH3 RNU6-193P-201ENST00000410977 107 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms