Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SSXP9-201ENST00000417503 292 ntBASIC1.75□□□□□ -2.13
RPL39P62891 MTND2P16-201ENST00000419987 799 ntBASIC1.75□□□□□ -2.13
RPL39P62891 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.75□□□□□ -2.13
RPL39P62891 AL645937.1-202ENST00000421799 937 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.75□□□□□ -2.13
RPL39P62891 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL39P62891 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.75□□□□□ -2.13
RPL39P62891 AL512649.1-201ENST00000428997 581 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC109583.1-201ENST00000432156 268 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AL513328.1-201ENST00000446460 224 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPL39P62891 BX510359.1-201ENST00000456973 237 ntBASIC1.75□□□□□ -2.13
RPL39P62891 TMED11P-201ENST00000479478 690 ntBASIC1.75□□□□□ -2.13
RPL39P62891 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.75□□□□□ -2.13
RPL39P62891 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL39P62891 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL39P62891 AC092593.2-201ENST00000513866 913 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL39P62891 RNA5SP341-201ENST00000516261 117 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.75□□□□□ -2.13
RPL39P62891 AC079600.2-201ENST00000550076 130 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.75□□□□□ -2.13
RPL39P62891 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL39P62891 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL39P62891 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL39P62891 AC007687.1-201ENST00000602704 304 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC125494.3-201ENST00000602759 455 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC096947.1-201ENST00000603233 470 ntBASIC1.75□□□□□ -2.13
RPL39P62891 YPEL5P2-201ENST00000605553 359 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC006133.1-201ENST00000617106 264 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC004943.3-201ENST00000624116 600 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AL121594.5-201ENST00000631724 573 ntBASIC1.75□□□□□ -2.13
RPL39P62891 CRYM-AS1-204ENST00000637983 556 ntBASIC1.75□□□□□ -2.13
RPL39P62891 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPL39P62891 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
RPL39P62891 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL39P62891 AL118496.1-201ENST00000440201 1812 ntBASIC1.75□□□□□ -2.13
RPL39P62891 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPL39P62891 GABPAP-201ENST00000419271 1356 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AP000526.1-201ENST00000603308 1388 ntBASIC1.74□□□□□ -2.13
RPL39P62891 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.74□□□□□ -2.13
RPL39P62891 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RPL39P62891 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.74□□□□□ -2.13
RPL39P62891 RPL21P132-201ENST00000331267 462 ntBASIC1.74□□□□□ -2.13
RPL39P62891 FAT1P1-201ENST00000406588 507 ntBASIC1.74□□□□□ -2.13
RPL39P62891 HMGN2P35-201ENST00000412164 270 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 AL050321.1-201ENST00000432363 400 ntBASIC1.74□□□□□ -2.13
RPL39P62891 HSD52-202ENST00000436225 772 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 SLC31A1P1-201ENST00000451221 567 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AL109741.2-201ENST00000455561 343 ntBASIC1.74□□□□□ -2.13
RPL39P62891 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 FAM133DP-201ENST00000464802 691 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AL358832.1-201ENST00000497800 389 ntBASIC1.74□□□□□ -2.13
RPL39P62891 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.74□□□□□ -2.13
RPL39P62891 MTND4LP22-201ENST00000508209 276 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AC112673.1-201ENST00000513168 575 ntBASIC1.74□□□□□ -2.13
RPL39P62891 SNORA31.11-201ENST00000516528 139 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AC243972.3-201ENST00000539655 198 ntBASIC1.74□□□□□ -2.13
RPL39P62891 PRELID2P1-201ENST00000552837 301 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
RPL39P62891 ZNF192P1-203ENST00000565888 810 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL39P62891 RPL23AP78-201ENST00000599928 470 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AL020997.2-201ENST00000602607 184 ntBASIC1.74□□□□□ -2.13
RPL39P62891 DUXAP3-201ENST00000603616 594 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AC005156.1-201ENST00000613371 573 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AC009452.1-201ENST00000640823 606 ntBASIC1.74□□□□□ -2.13
RPL39P62891 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPL39P62891 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPL39P62891 AC005336.3-201ENST00000623833 2679 ntBASIC1.73□□□□□ -2.13
RPL39P62891 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL39P62891 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPL39P62891 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RPL39P62891 MIR21-201ENST00000362134 72 ntBASIC1.73□□□□□ -2.13
RPL39P62891 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.73□□□□□ -2.13
RPL39P62891 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RPL39P62891 AF274854.1-201ENST00000413236 615 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC009302.1-201ENST00000417147 390 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC005517.2-201ENST00000424673 553 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL39P62891 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL39P62891 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL39P62891 VN1R48P-201ENST00000448149 1036 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AP001992.1-205ENST00000462248 379 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC020898.1-201ENST00000474167 787 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL39P62891 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL39P62891 SNORA67.7-201ENST00000516664 135 ntBASIC1.73□□□□□ -2.13
RPL39P62891 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL39P62891 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL39P62891 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.73□□□□□ -2.13
RPL39P62891 AC087241.2-201ENST00000535801 324 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC022080.3-201ENST00000544433 482 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL39P62891 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL39P62891 AC005412.1-201ENST00000580812 1049 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms