Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDH4P55283 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH4P55283 HSFY4P-201ENST00000415994 1181 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AC073508.1-201ENST00000428866 656 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AC010881.1-201ENST00000433830 235 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH4P55283 AC008155.2-201ENST00000464337 397 ntBASIC3.5□□□□□ -1.85
CDH4P55283 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.5□□□□□ -1.85
CDH4P55283 FCF1P3-201ENST00000496394 590 ntBASIC3.5□□□□□ -1.85
CDH4P55283 RPL23AP55-201ENST00000498163 452 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.5□□□□□ -1.85
CDH4P55283 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH4P55283 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.5□□□□□ -1.85
CDH4P55283 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH4P55283 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH4P55283 AC011611.1-201ENST00000552179 197 ntBASIC3.5□□□□□ -1.85
CDH4P55283 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH4P55283 AC104229.1-201ENST00000561364 255 ntBASIC3.5□□□□□ -1.85
CDH4P55283 ZNF192P1-203ENST00000565888 810 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH4P55283 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH4P55283 AC022146.1-201ENST00000595307 847 ntBASIC3.5□□□□□ -1.85
CDH4P55283 BNIP3P4-201ENST00000604946 565 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AC245100.7-201ENST00000609678 442 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AC005156.1-201ENST00000613371 573 ntBASIC3.5□□□□□ -1.85
CDH4P55283 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDH4P55283 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.5□□□□□ -1.85
CDH4P55283 AP006248.3-201ENST00000623580 594 ntBASIC3.5□□□□□ -1.85
CDH4P55283 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH4P55283 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH4P55283 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH4P55283 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
CDH4P55283 MFSD8-213ENST00000641134 1327 ntBASIC3.49□□□□□ -1.85
CDH4P55283 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH4P55283 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 SNORD56.4-201ENST00000363883 71 ntBASIC3.49□□□□□ -1.85
CDH4P55283 OR6K3-202ENST00000368146 996 ntBASIC3.49□□□□□ -1.85
CDH4P55283 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH4P55283 RNU6-1151P-201ENST00000384684 107 ntBASIC3.49□□□□□ -1.85
CDH4P55283 MIR34B-201ENST00000385076 84 ntBASIC3.49□□□□□ -1.85
CDH4P55283 MIR607-201ENST00000385241 96 ntBASIC3.49□□□□□ -1.85
CDH4P55283 Z99755.1-201ENST00000414048 380 ntBASIC3.49□□□□□ -1.85
CDH4P55283 PAICSP7-201ENST00000419829 962 ntBASIC3.49□□□□□ -1.85
CDH4P55283 FAM204CP-201ENST00000424489 642 ntBASIC3.49□□□□□ -1.85
CDH4P55283 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH4P55283 AL158071.1-201ENST00000430315 461 ntBASIC3.49□□□□□ -1.85
CDH4P55283 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 AC097262.1-201ENST00000452559 548 ntBASIC3.49□□□□□ -1.85
CDH4P55283 RPS15AP1-201ENST00000457423 391 ntBASIC3.49□□□□□ -1.85
CDH4P55283 RPL23AP67-201ENST00000465341 474 ntBASIC3.49□□□□□ -1.85
CDH4P55283 RPL7P49-201ENST00000471402 708 ntBASIC3.49□□□□□ -1.85
CDH4P55283 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 AC112198.1-201ENST00000505369 1220 ntBASIC3.49□□□□□ -1.85
CDH4P55283 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 MTCYBP41-201ENST00000528913 1123 ntBASIC3.49□□□□□ -1.85
CDH4P55283 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH4P55283 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH4P55283 AC074050.1-201ENST00000563247 211 ntBASIC3.49□□□□□ -1.85
CDH4P55283 CYP2C60P-201ENST00000566088 139 ntBASIC3.49□□□□□ -1.85
CDH4P55283 AC095057.3-201ENST00000567102 1157 ntBASIC3.49□□□□□ -1.85
CDH4P55283 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH4P55283 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH4P55283 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH4P55283 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH4P55283 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 HSPE1P14-201ENST00000605812 302 ntBASIC3.49□□□□□ -1.85
CDH4P55283 AC068620.4-201ENST00000636730 1182 ntBASIC3.49□□□□□ -1.85
CDH4P55283 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CDH4P55283 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CDH4P55283 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH4P55283 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 RNU6-374P-201ENST00000364146 108 ntBASIC3.48□□□□□ -1.85
CDH4P55283 SNORA7.2-201ENST00000364446 145 ntBASIC3.48□□□□□ -1.85
CDH4P55283 RNU6-335P-201ENST00000364563 113 ntBASIC3.48□□□□□ -1.85
CDH4P55283 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 RNA5SP44-201ENST00000410446 133 ntBASIC3.48□□□□□ -1.85
CDH4P55283 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 AC008173.1-201ENST00000418901 264 ntBASIC3.48□□□□□ -1.85
CDH4P55283 OR1AA1P-201ENST00000419597 916 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AL513174.1-201ENST00000423182 629 ntBASIC3.48□□□□□ -1.85
CDH4P55283 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH4P55283 AC008264.1-201ENST00000447612 367 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AL500527.1-201ENST00000448532 255 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms