Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC009313.2-201ENST00000417893 1941 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 RNU6-492P-201ENST00000363035 104 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 SNORD35B-201ENST00000363660 87 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 RNA5SP97-201ENST00000365006 84 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 NCSTNP1-201ENST00000406229 144 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 RPL23AP47-201ENST00000408017 460 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC009302.1-201ENST00000417147 390 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AL513175.1-201ENST00000431492 780 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 MTCYBP39-201ENST00000437562 491 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AL360221.1-201ENST00000445989 335 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 MTCO3P16-201ENST00000454456 754 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC008155.2-201ENST00000464337 397 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 RPL21P71-201ENST00000465598 459 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 SETP14-201ENST00000497538 873 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 MTCO1P30-201ENST00000515244 580 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 RN7SKP18-201ENST00000516005 275 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC091488.1-201ENST00000604239 660 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AL137843.1-201ENST00000605078 385 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC090116.1-201ENST00000615679 446 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC008443.7-201ENST00000622195 246 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC127502.3-201ENST00000636170 1206 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RAPGEF3O95398 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 AC107982.1-201ENST00000507171 1300 ntBASIC5.96□□□□□ -1.46
RAPGEF3O95398 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPGEF3O95398 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAPGEF3O95398 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 RPS7P15-201ENST00000415804 584 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 RPL21P23-201ENST00000446654 460 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 NCOR1P1-202ENST00000486162 291 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 ARL4AP1-201ENST00000503220 705 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 MTND3P5-201ENST00000512798 333 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 OR5AK1P-201ENST00000524837 922 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 AC093519.1-201ENST00000566109 298 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 MIR5187-201ENST00000583479 76 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 AL158063.1-201ENST00000615349 536 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 MAPK10-320ENST00000641462 6696 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAPGEF3O95398 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RAPGEF3O95398 CDR1-202ENST00000625883 1485 ntBASIC5.95□□□□□ -1.46
RAPGEF3O95398 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAPGEF3O95398 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAPGEF3O95398 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAPGEF3O95398 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAPGEF3O95398 RNU6-500P-201ENST00000362349 107 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 Y_RNA.194-201ENST00000363985 102 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 SNORA4.1-201ENST00000364263 144 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 RPL7P60-201ENST00000397636 735 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 RNU6-920P-201ENST00000410926 92 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 RPS26P40-201ENST00000435209 294 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 RPS25P9-201ENST00000435591 252 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 AC004865.1-201ENST00000442276 1003 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 AL591623.2-201ENST00000449978 222 ntBASIC5.94□□□□□ -1.46
RAPGEF3O95398 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.94□□□□□ -1.46
RAPGEF3O95398 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms