Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNA5SP320-201ENST00000516263 124 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC068657.1-201ENST00000520807 306 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC009039.2-201ENST00000624524 529 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC092593.1-201ENST00000515413 1815 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AL513477.1-202ENST00000417061 214 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC233981.1-201ENST00000423224 461 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 B3GNT2P1-201ENST00000434960 952 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC245517.2-201ENST00000442890 346 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC122134.1-201ENST00000565664 1104 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC011492.1-201ENST00000600023 315 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 MIR7153-201ENST00000637758 57 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC093908.1-201ENST00000623125 8092 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AL353743.4-201ENST00000422653 1547 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 RNA5SP68-201ENST00000363885 119 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 MIR196B-201ENST00000384852 84 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 MIR504-201ENST00000385065 83 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 MIR764-201ENST00000390811 85 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 MRPS33P4-201ENST00000434892 317 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC079089.3-201ENST00000603094 673 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC026790.2-201ENST00000606282 430 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC064859.1-201ENST00000624741 174 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 AC093311.1-201ENST00000506586 2021 ntBASIC3.51□□□□□ -1.85
SCN11AQ9UI33 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
SCN11AQ9UI33 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN11AQ9UI33 AC112220.1-201ENST00000434628 355 ntBASIC3.5□□□□□ -1.85
SCN11AQ9UI33 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN11AQ9UI33 RPL23AP31-201ENST00000456160 467 ntBASIC3.5□□□□□ -1.85
SCN11AQ9UI33 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN11AQ9UI33 AC091515.1-201ENST00000548110 679 ntBASIC3.5□□□□□ -1.85
SCN11AQ9UI33 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AC005189.1-201ENST00000431286 310 ntBASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AP004217.1-201ENST00000480579 346 ntBASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AL109741.3-201ENST00000561748 592 ntBASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AC106734.1-201ENST00000568646 663 ntBASIC3.49□□□□□ -1.85
SCN11AQ9UI33 BMS1P7-201ENST00000602440 1052 ntBASIC3.49□□□□□ -1.85
SCN11AQ9UI33 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN11AQ9UI33 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 MIR887-201ENST00000401258 79 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AL513328.1-201ENST00000446460 224 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC104058.1-201ENST00000448028 297 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 NECAP1P2-201ENST00000455668 727 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 HSPE1P6-201ENST00000479457 291 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC008413.1-201ENST00000511864 177 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC005046.1-201ENST00000608515 625 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC090115.4-201ENST00000609970 188 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 MIR6817-201ENST00000615588 66 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC046144.1-201ENST00000478559 1853 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 OR11H5P-202ENST00000641612 1325 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 MIR365B-201ENST00000362317 111 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 RNA5SP508-201ENST00000411327 119 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AL603825.1-201ENST00000438481 80 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AL357520.1-201ENST00000441557 453 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 DYNLL1P6-201ENST00000503440 264 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 RNU6-1231P-201ENST00000517185 103 ntBASIC3.48□□□□□ -1.85
SCN11AQ9UI33 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN11AQ9UI33 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms