Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 PWAR6-201ENST00000552334 4618 ntBASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 MTND4P31-201ENST00000425607 1343 ntBASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.3□□□□□ -1.72
NPC1L1Q9UHC9 SAGE4P-201ENST00000442271 3381 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 Y_RNA.510-201ENST00000384511 114 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 GSTA8P-201ENST00000404253 637 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 RPL31P12-201ENST00000422587 358 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AL121882.1-201ENST00000422893 417 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AL136097.1-201ENST00000456945 913 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 IGHV3-32-201ENST00000519182 355 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC022790.1-201ENST00000522872 204 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 POLR2KP1-201ENST00000553226 168 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 ZNF92P3-201ENST00000596594 954 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC009948.4-201ENST00000604692 675 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC009452.1-201ENST00000640823 606 ntBASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.29□□□□□ -1.72
NPC1L1Q9UHC9 AC010385.1-201ENST00000412374 256 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 MTCO3P4-201ENST00000419236 787 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 RWDD4P2-201ENST00000426392 563 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 RPS27P5-201ENST00000444247 244 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC108729.2-201ENST00000476543 840 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 RWDD4P1-201ENST00000488019 565 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC025768.1-201ENST00000510057 267 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 SNORA70.14-201ENST00000516205 110 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AP001207.2-201ENST00000519490 539 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 CIR1P1-201ENST00000524055 1133 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 OSBPL9P3-201ENST00000534523 595 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 MIR4458-201ENST00000578872 75 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC073592.7-201ENST00000623659 507 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 FRG1DP-201ENST00000635586 771 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 MTND5P11-201ENST00000511037 1812 ntBASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPC1L1Q9UHC9 RPL23AP57-201ENST00000332361 466 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 U3.11-201ENST00000364476 212 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AL024507.1-201ENST00000412741 274 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 MTATP6P19-201ENST00000413797 659 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 MORF4L1P7-201ENST00000426038 703 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC023050.1-201ENST00000498198 304 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC023141.12-201ENST00000512399 199 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 MIR3186-201ENST00000577404 85 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 VN1R79P-201ENST00000593540 513 ntBASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NPC1L1Q9UHC9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms