Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL035404.1-201ENST00000497982 568 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 NPM1P35-201ENST00000533043 868 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AL450489.1-201ENST00000612071 468 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AC145207.9-201ENST00000623802 325 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AC000403.1-201ENST00000613696 3585 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 ASNSP3-201ENST00000451989 1306 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC011155.1-201ENST00000316512 456 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 RNU6-859P-201ENST00000362728 107 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 RNA5SP107-201ENST00000411358 122 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL445528.1-201ENST00000426330 420 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 CFTRP1-201ENST00000456646 183 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC090525.1-201ENST00000479116 478 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC006023.1-201ENST00000603944 259 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL096803.3-201ENST00000609032 532 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 OR5J1P-201ENST00000313544 939 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 RNU6-233P-201ENST00000410845 141 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC105402.2-201ENST00000438503 358 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 RN7SL75P-201ENST00000461926 281 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC010627.1-201ENST00000503819 1294 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC022790.1-201ENST00000522872 204 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC019131.2-201ENST00000609071 870 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL356274.1-201ENST00000617064 410 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AC007998.5-201ENST00000622938 237 ntBASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KIAA1549Q9HCM3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 Y_RNA.62-201ENST00000362840 99 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 XGY1-201ENST00000381172 446 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 CACYBPP2-201ENST00000453625 678 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC069306.1-201ENST00000507006 843 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AL161713.1-201ENST00000555538 145 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC010200.2-201ENST00000605098 235 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC007619.2-201ENST00000605743 379 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 SNORA48.8-201ENST00000391324 134 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 SNX5P1-201ENST00000505757 1041 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AL591516.1-201ENST00000611326 274 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AL355493.4-201ENST00000618530 292 ntBASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.6□□□□□ -1.99
KIAA1549Q9HCM3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
KIAA1549Q9HCM3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
KIAA1549Q9HCM3 AL353746.1-201ENST00000566293 6881 ntBASIC2.59□□□□□ -1.99
KIAA1549Q9HCM3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
KIAA1549Q9HCM3 AC107081.3-201ENST00000612715 2034 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms