Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RAB11AP1-201ENST00000442978 646 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AL353718.1-201ENST00000451028 517 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 MTCO3P16-201ENST00000454456 754 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 RPL23AP44-201ENST00000482216 473 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 RPS3AP50-201ENST00000487064 803 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 RPS27P23-201ENST00000487608 251 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC104108.1-201ENST00000509930 412 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 OSBPL9P3-201ENST00000534523 595 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC007458.1-201ENST00000542812 373 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 DUXAP6-201ENST00000553858 601 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AL121576.1-201ENST00000556055 276 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 MTCYBP28-201ENST00000566728 1132 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC011816.2-201ENST00000607089 556 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC006213.5-201ENST00000619673 288 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC005183.1-201ENST00000603687 1979 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
RPRD1AQ96P16 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.59□□□□□ -1.84
RPRD1AQ96P16 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC068647.1-201ENST00000489539 2265 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 SNORA51.2-201ENST00000364595 132 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 RNU6-272P-201ENST00000411028 104 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 RPS3AP25-201ENST00000411660 793 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AL158050.1-201ENST00000416077 457 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AL512661.1-201ENST00000434586 1253 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 RPL26P28-201ENST00000451325 435 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 RPL12P26-201ENST00000452430 487 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 SETP14-201ENST00000497538 873 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC104115.2-201ENST00000523026 687 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 UBE2NP1-201ENST00000545592 458 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AL845331.3-202ENST00000562856 261 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 MIR4504-201ENST00000577413 92 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 BNIP3P33-201ENST00000598912 569 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AL592295.2-201ENST00000612578 206 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC005156.1-201ENST00000613371 573 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC244100.1-202ENST00000621554 382 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC008432.1-201ENST00000615912 1320 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AC021755.1-201ENST00000559747 1447 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 MTND5P28-201ENST00000438005 1594 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 AL645937.1-201ENST00000641739 1652 ntBASIC3.58□□□□□ -1.84
RPRD1AQ96P16 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.58□□□□□ -1.84
RPRD1AQ96P16 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC234772.1-201ENST00000377927 937 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 MIR490-201ENST00000384865 128 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 MIR183-201ENST00000384958 110 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 MIR591-201ENST00000385290 95 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC005517.2-201ENST00000424673 553 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 HMGB1P12-201ENST00000438594 598 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 PRSS3P4-201ENST00000453323 162 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 RPS4XP13-201ENST00000483219 789 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 RPL21P47-201ENST00000483696 477 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms